| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0572 |
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| Symbol | |
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| ID | 8490548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 595490 |
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| End bp | 597550 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358599 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003238570 |
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| Protein GI | 260892473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0758735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCATC TTATCATAGT GGAGTCGCCG GCCAAGGCCC GGACGCTTTC TAAGTTTCTA
GGCTCTCAGT TCCTGGTAAA AGCTTCTATG GGACACGTGC GCGACCTTCC CAAGAGCGAG
CTGGGGGTGG ATCTGGAAAA CGGCTTCACT CCCAAGTACG TCACCATAAG AGGCAAGGGG
AAGGTGATCC AGGAGCTTAA AAGCTACGTG GCCAAGGCCG ATACGGTGCT CATGGCCTCC
GACCCCGACC GCGAAGGGGA GGCCATTGCC TGGCATCTTT GCCATCTCTT AGGCATACCT
CCGGAGACTC CTTGCCGCGT TGAGTTTCAC GAGATCACCA AGAACGCGGT CTTGAACTCC
TTAAAGTCCC CCCGCCCCAT CGACCTCAAC AGAGTGAACG CCCAGCAGGC GCGGCGGGTT
TTGGATCGGC TGGTGGGTTA CGGCCTGAGC CCGCTCTTGT GGCGCAAGGT GAAGCGGGGG
CTTTCGGCCG GCCGGGTGCA GTCGGTGGCC CTGAGATTGG TGGTCGAGCG GGAGGAAGAG
ATAGAGGCTT TCAAGCCCGA AGAGTACTGG GACCTGGCGG TCTGGCTCCT TACCCCGGAA
GAAGAGCGGG TCTTGGCCAG GTTGGCCCGC TTTAAGGGCA AAAAGTTCAC CTGCCGCACG
GCGGAGGAAG TGGAGAGGGT CAAGAGTGCT ACGGCCTCGG CCGCCTTCAG GGTGGCACGG
GTCGTCCGGC AAGAAAGAAG TAAAGCGCCC CCTTTACCCT TCACCACCAG CCAGATGGTG
CAGGAGGCTA ACCGCCGCCT GGGCATGCGA TTGGAGCGCA CCATGGCCGT GGCCCAGCAG
CTCTACGAGG GGGTGGACCT GGGGCCAGAA GGTCCGGTGG GGCTGATAAC CTACATCCGC
ACTGACTCTA CCCGCGTGTC GGAGGAGGCT AAAGAGAGGG CCTGGGCCTT CATAAAGGAG
CACTACGGAG CCGAGTTTGT GGGCGATGTC CCGCCCAAGG AAAGGAAAGC CAAAGGTCGG
GTGGAGGACG CTCACGAGGC CATAAGGCCC ACCGATGTCT ACCGGACGCC GGAGAAGGTC
AAGCCCTACC TTACCCCAGA TCAGTACAAG CTCTACCGGC TCATCTGGGA GCGCTTCCTG
GCGGCTCATA TGGCGCCGGC CAAATACTTC CTCACCCGTG CGGAAATAGA GGTGGGGGAC
TACACCTTCT ATGCCACGGG TCGTCAATTA CTCTTTCCTG GCTTCTTGCG CCTCTGGCGC
CCGGAAGAAG AGGAAGAAGA AGGGAAGCTT CCTCCTTTGC GGGAAGGGGA GGTTCTTACC
TTCCAGGAGT TCGTCCCCCA GCAGCACTTT ACTACACCGC CGCCTCGCTA TACAGAAGGC
ACGCTGGTCA AAGCGCTGGA GGAGAAGGGG GTGGGGCGCC CCAGCACCTA CGCCCCCACC
ATCGAGACCA TTCTCAAGCG GGGCTATGTG GTGCGGGTGG ACAAATATCT GCACCCCACC
CCTTTAGGAA GAACGGTGGT GGAGCTCCTA AAGGAGCACT TCCCAGGCAT AGTGGATGTG
GGCTTTACCG CGGCCATGGA GGAGAAGCTC GACCTGGTAG AAGAGGGACA GGCCGATTGG
GTGGACATCC TGCGCGAGTT CTACCAGTCT TTCAGTCAGG ATTTAGTACG AGCGGATGCG
GCCATCGAGA AGGTGTCCCT CCCCGACACC TTCACCGATA TTTCCTGCCC CCGATGCGGC
TGCCCCATGG TGAAAAAGAC GGGGCGCTAC GGGGAGTTCC TGGCCTGCTC CGGCTATCCG
GAGTGCCAGA TGCGGATGCC GGTAGGGACG GGGGTGAAAT GCCCGCGCTG CGGAGGGGAG
CTGGTAAAGC GTCGCAGCAA GAAGGGGAGG TACTTCTACG GCTGCAACCG CTACCCCGAA
TGCAACTTTG TGGTCTGGTC GGAACCTGTG CCCGAGCCCT GCCCGGAGTG CGGGAGCCTG
ATGGTGCGAC GAGGCAGAGG GAAGAAGAAG CGGGTTATCT GCACCAACGA GTCGTGCGGC
TACCAGCGAC TTGAGGAGTG A
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| Protein sequence | MKHLIIVESP AKARTLSKFL GSQFLVKASM GHVRDLPKSE LGVDLENGFT PKYVTIRGKG
KVIQELKSYV AKADTVLMAS DPDREGEAIA WHLCHLLGIP PETPCRVEFH EITKNAVLNS
LKSPRPIDLN RVNAQQARRV LDRLVGYGLS PLLWRKVKRG LSAGRVQSVA LRLVVEREEE
IEAFKPEEYW DLAVWLLTPE EERVLARLAR FKGKKFTCRT AEEVERVKSA TASAAFRVAR
VVRQERSKAP PLPFTTSQMV QEANRRLGMR LERTMAVAQQ LYEGVDLGPE GPVGLITYIR
TDSTRVSEEA KERAWAFIKE HYGAEFVGDV PPKERKAKGR VEDAHEAIRP TDVYRTPEKV
KPYLTPDQYK LYRLIWERFL AAHMAPAKYF LTRAEIEVGD YTFYATGRQL LFPGFLRLWR
PEEEEEEGKL PPLREGEVLT FQEFVPQQHF TTPPPRYTEG TLVKALEEKG VGRPSTYAPT
IETILKRGYV VRVDKYLHPT PLGRTVVELL KEHFPGIVDV GFTAAMEEKL DLVEEGQADW
VDILREFYQS FSQDLVRADA AIEKVSLPDT FTDISCPRCG CPMVKKTGRY GEFLACSGYP
ECQMRMPVGT GVKCPRCGGE LVKRRSKKGR YFYGCNRYPE CNFVVWSEPV PEPCPECGSL
MVRRGRGKKK RVICTNESCG YQRLEE
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