| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0571 |
|---|
| Symbol | |
|---|
| ID | 8490547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 594366 |
|---|
| End bp | 595493 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646358598 |
|---|
| Product | DNA protecting protein DprA |
|---|
| Protein accession | YP_003238569 |
|---|
| Protein GI | 260892472 |
|---|
| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
|---|
| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.607235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTCGG CGGAAGAGCG CCCTTACTAC TTGGCCTGGC AGCTTTTACT TCCCGGCCAG
TCGCGGCGGG TGAAAGGGCT CATCTCTTTT TTCGGCTCGG CGCGCGAGGC CTTTCTGGCT
TCTCCTAGGC ACTGGGCCAG CGTGGTGGGG GAGAGACTGG CGGAGGCCCT GGCGGGCCGG
AAGGCGAAGC TCGATCTAAA AAAGGAAGAA GAGCGCCTCA GGAAGTCGGG GGTGCGCTAC
GTCACCCTGG CCGAGCCGGA GTATCCGGCT TTACTGCGGG AGATAGACTC GCCGCCGGCA
GCCCTCTTCT ACCTGGGAGA GATAAGGCAG GAGGAGCGGG CTGTAGCCAT AGTGGGAACC
CGGCGCCCAA CCCGCTACGG CCGGGAAGTG GCGGAGAGCT TGGCCAGTGA TCTAGCCCGC
TTCGGCGTGA CCGTGGTGAG CGGCCTGGCC CGGGGTATCG ACGCGGCGGC CCACCGGGGG
GCGCTTTCCG GCGGGGGGCG CACCCTGGCG GTTCTGGGCA CGGGTTGCGA CCGCTGCTAC
CCCCGCGAGA ACTGGAATCT CTGGCGGGAG ATAGAAAGGA AGGGAGCCCT CGTCTCCGAG
TTTCCCCTGG GGACTGAGGC ACGCCCCTGG CATTTCCCGG TGCGCAACCG GATAATAGCG
GGGCTGGTCC ACGCCGTGAT CGTGGTGGAG GCGCCCGAGA AGAGCGGCGC CCTGATAACG
GCCGATCTGG CGCTGGAGTA CGGCCGAGAG GTGCTGGCCG TACCTGGCCG GGTGACCACC
CCGCAGGCTA AAGGTTCCCA TCTTTTGCTG AAGCAGGGAG CTTACCTGGT GGAAAAAGCA
GAGGACGTTT TGGAAGTACT GGGCTGGGAG ATAATTGGGG CGGAGGAAGA AAAGGATTTG
GCGTTGAATC CAGAAGAGGA GGAAATAGTT TCCCTGCTGG CGGCCGGTTT TCTTTCCCTG
GAGGAACTGG TAGAGCGAGG TAAGATGCCG GTGGACGCCT GTCTTAGCCT GCTCTCCATG
CTAGAACTCA AGGGGGTAGT GCGGCCCGGA GGTGGGGGAA CCTATCTGCT CACGCGGCAG
GGAGAAAATC TGCTTCGCTC CCGGAGGGGA AAGGGGGATC CAAGGTGA
|
|---|
| Protein sequence | MSSAEERPYY LAWQLLLPGQ SRRVKGLISF FGSAREAFLA SPRHWASVVG ERLAEALAGR
KAKLDLKKEE ERLRKSGVRY VTLAEPEYPA LLREIDSPPA ALFYLGEIRQ EERAVAIVGT
RRPTRYGREV AESLASDLAR FGVTVVSGLA RGIDAAAHRG ALSGGGRTLA VLGTGCDRCY
PRENWNLWRE IERKGALVSE FPLGTEARPW HFPVRNRIIA GLVHAVIVVE APEKSGALIT
ADLALEYGRE VLAVPGRVTT PQAKGSHLLL KQGAYLVEKA EDVLEVLGWE IIGAEEEKDL
ALNPEEEEIV SLLAAGFLSL EELVERGKMP VDACLSLLSM LELKGVVRPG GGGTYLLTRQ
GENLLRSRRG KGDPR
|
|---|
| |