| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0541 |
|---|
| Symbol | |
|---|
| ID | 8490516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 558440 |
|---|
| End bp | 560782 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646358567 |
|---|
| Product | phenylalanyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_003238539 |
|---|
| Protein GI | 260892442 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTTGG ACGAGCCCCA GGCCTTGGCC GAGCGGCTAA CGGCGGTGGG AGTTGCGGTG
GACACGGTGG AGCCCTTCGG GATGGGCATT GAAGGGGTGG TTACTGCCCG GCTGTTGGAG
GTCTCCCCCC ATCCCAATGC CGACCGCCTG CGGATCTGTC AGGCCGACAC CGGCAGCGAG
GTTTACGAGG TCGTAACCGG GGCGGACAAC GTTTTTCCGG GGGCGGTGGT GCCCCTGGCG
CTGGTGGGAG CGCGGCTGGC CAACGGCCAA GTGATAAAAA AGGCCCGTTT CCGCGGGGTG
ACCTCCAACG GCATGCTCTG CTCGGAAGAG GAGCTGGGCC TGGAAGAGCG CTCGGCGGGG
ATCATGATCC TCCCACCGGA CACCCCCATA GGGGAGGACA TACGTAAGCT TTTGGGGTTG
CCGGACTGGG TGCTGAACCT CGACCTCACC CCCAACCGGG GAGACTGCCT TTCTATTTTC
GGGGTAGCCC GGGAAGTGGC CTCCATCTAC GGCGTGGAGC TGAAGGAGCC GCCAGTACTC
GAGAAGGGAG AGGCGGGAGA AGAGGAGATA GAGGTGGAGA TCGAGGCGCC GGAGCTCTGC
GGCCGCTACC TGGCCCGCCT CTTCAAGGAA GTGAAGATAG GGCCTTCTCC TTTATGGATG
CAGACGCGCC TGCGGGCGGC CGGCATGCGC CCCATAAACA ACGTGGTGGA CGTAACCAAC
TACGTGATGC TGGAGTTGGG GCAGCCCTTG CACGCTTTCG ACTACACCAC CATCAGGGGC
AAGCGTATCG TCGTGCGCCG GGCCCGGCCG GGAGAGGAAC TCGTGCTGCT TGACGGCTCG
CTTCTGCGGC TGGGGCCGGA AAACCTGGTT ATAGCCGACG CTGAGCGGGC AGTGGCCCTG
GCCGGTATCA TGGGCGGCCG GGATACGGAG ATCAAAGACG ACACCACCAC CGTACTTCTG
GAAGCGGCTC GTTTTGACCC CCTGAACATA AGGCGCACGG CCAAGAGCTT CGGCCTGCGC
ACCGAAGCCT CACTGCGCTT CGAGCGGGGG GTGGATATAG AAGGAGTGCG GCGGGCGGCC
GACCGCACTG CCTACCTGGT GGAGAAGATA GGAGCGGGGC GGGCGCTTTC TCTGGTGGTG
GATCGGTACG TGGCTAAGCG CCTTTACCGG ACGATCCTGG TCCGGCCGGA GAAAGTAGAG
GCCATCCTGG GGACTTCCTT CCCCTACCGG GAGGTGGCCG ACAAGCTCAG GCGCTTAGGC
TTCCAGTTGG AGGAGTCGGA GGAGGGCTGG CGGGTCTATG TTCCCTCCTT CCGGCACGAC
GTGGCGCTGG AGGAGGACAT GGTGGAGGAA ATAGCCCGGG TGTACGGCTA CGACCGGATA
CCCACCACTT TGCCGGAAGG AGAGACCACG CCGGGGAAAC AGCCGGCGGA GCGAGCGTTC
GTGCGCCGCT TGAAGTCTTT GCTCACGGGC TTCGGTCTGA GTGAGGTCAT CACCTACAGT
TTCATTAATC CCCGGGACCT CCAGCGGCTG GGGGTAGAAT TGGAAGCTTT AAAGCTCCGT
AACCCCTTGA GCGAAGAACA AGCGGTTCTG CGTACCACCC TTCTGCCTGG TCTTGTGGGG
GTGCTGGCCC GCAACGCGGC CCACCGTGTG AAGGGCCTGA GCGTTTTCGA GGTAGGCCGG
GTGTTCCTGC CGGGCAGCAA TACCCTGCCA GATGAGAGGC TGATGCTGGG CCTAGCGGCC
ATGGGCACTT CCCCCCGCCA CTGGTTAACT CCCTCGCCCA TCCCCTACGA CTTCTTCTAC
CTCAAAGGGG TGGTGGAAGC CCTATGCCGG GCTCTGGGAA TAAAAGGAGT TTCCTTCGTT
CCCCTTGACT CCCACCCGGC TCTGCATCCG GGACGGGCGG CCCGGCTGGA GGTGGGGGGC
CAGGAGCTGG GCTTCCTGGG GGAGTTGCAT CCACGCCTGC AGGAAGATTA TGATCTTCCC
GCCCGGGCGG TGGTGGCCGA GCTGGCGGTG GCGGCGCTTT TCGCCCAGGC CAAGCCTCCT
GCTTTCCGAC CCCTGCCCCG CTACCCTGGA GTGGCGCGCG ACCTGTCCTT CGTGGTTCGG
CAGGAGATCC CGGTAGCGGT GGTGGAGGCT AAGATAAGGG AGGCGGCGGG GAAGTTACTC
AAGGAACTCG AGCTTTTCGA CGTTTACGTG GGGCCGCACC TTCCTCCCGG TACCCGCAGC
CTGGCCTTCG GCCTCTTTTT CCAGGCGGAG GACCGCACCC TCACCGAGGA AGAGGTTAAC
GAGCGGGTAG AAAAGATAGT AAGGCGCTTG CGGGAGGATC TAGGGGCCGA GTTACGGGGG
TAA
|
|---|
| Protein sequence | MDLDEPQALA ERLTAVGVAV DTVEPFGMGI EGVVTARLLE VSPHPNADRL RICQADTGSE
VYEVVTGADN VFPGAVVPLA LVGARLANGQ VIKKARFRGV TSNGMLCSEE ELGLEERSAG
IMILPPDTPI GEDIRKLLGL PDWVLNLDLT PNRGDCLSIF GVAREVASIY GVELKEPPVL
EKGEAGEEEI EVEIEAPELC GRYLARLFKE VKIGPSPLWM QTRLRAAGMR PINNVVDVTN
YVMLELGQPL HAFDYTTIRG KRIVVRRARP GEELVLLDGS LLRLGPENLV IADAERAVAL
AGIMGGRDTE IKDDTTTVLL EAARFDPLNI RRTAKSFGLR TEASLRFERG VDIEGVRRAA
DRTAYLVEKI GAGRALSLVV DRYVAKRLYR TILVRPEKVE AILGTSFPYR EVADKLRRLG
FQLEESEEGW RVYVPSFRHD VALEEDMVEE IARVYGYDRI PTTLPEGETT PGKQPAERAF
VRRLKSLLTG FGLSEVITYS FINPRDLQRL GVELEALKLR NPLSEEQAVL RTTLLPGLVG
VLARNAAHRV KGLSVFEVGR VFLPGSNTLP DERLMLGLAA MGTSPRHWLT PSPIPYDFFY
LKGVVEALCR ALGIKGVSFV PLDSHPALHP GRAARLEVGG QELGFLGELH PRLQEDYDLP
ARAVVAELAV AALFAQAKPP AFRPLPRYPG VARDLSFVVR QEIPVAVVEA KIREAAGKLL
KELELFDVYV GPHLPPGTRS LAFGLFFQAE DRTLTEEEVN ERVEKIVRRL REDLGAELRG
|
|---|
| |