| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0494 |
|---|
| Symbol | |
|---|
| ID | 8490469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 513038 |
|---|
| End bp | 514039 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646358522 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
|---|
| Protein accession | YP_003238494 |
|---|
| Protein GI | 260892397 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.547109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGC TGCTTTTCTT GGGGATTACT ATCATCCTTT TGGGCTTAGC CCTGGCCTTC
TGGTATCGGG AGGGGAAAAG GATCTCCTCC ACACCCGGAA CCCAGGAACT CACCGTGCTT
CTTCCCTCCC CACGGGTGGA GTTTCTTCCC CTTTACTGGG CGGCAGCCAG TGGAGAGGCC
GAAAAGGAAG GTCTGGTTTT AAAACTTTTG CCTTCCGCTT CGCCTTCACC GGGAGAGAAG
ACCCTGGCCG CCCTTACCGC CGAAGAGGCG CTGTGCGGCC GCACCCTGGA GGGGAAGAAG
TGGAAGGTGG TGGCGCTTCT CTCCGAGAAG GAACTCGCCT GGCTGGCTGG TCGTCAACCT
TTCCGGTGGG AAGACTTGCC GGGCAAGAAG GTGATTACCC CGGCGGCCGA GCAGGGCTTA
ACCGCCGCTT TCGAGGAGGT GCTGCGCGAG CAGGGCTGGC GGCCGCACCG CGACCTCATC
TTAATCACCA ACCTCCCGCC GCACCTGCGC CTGCCCGCCT TCGCCGCCGG AGTGGGAGAC
CTGCTTCTTA CCCCCGACCC CTTGATCCTG TCCGGCCGTT TCCGGTTTAG TTCCCTTCCC
CTATCTTTAC CCCCTTTCCC GCGCTGGGTT CTGGTGGCCG AAGAAGGAAG GGTTCCGGAA
AAAGCGGTTC TCGCTCTCGG CCGGGCGCTC GAGGCGAGTC AGGCCAAGCT TTACAGTCTC
CCTCCGCAAG AAATCGCTGG GGAGACGGCA GTCTTTTTCC CGCAGCTGAG CCTGGAAGTT
CTTACCCGCG CAATCGACCG GGCCCAGCGG GAGAGAATAT GGAAGGCGGG CGAACTGCCC
CACCCCCAAG CCTTCGCCCG CCTCCAAGAA ATACTGAAGC GGGCGGGGGA ACTTCCCCGC
CCGCTGGATT ACCAAGAGCT CTTCTTTACG CCTGCCCCCA GGCCATTGAG GGAGGAAGGG
AACAGGGCAG GCGGCTCTGC GTCTGCGGCT CCTCGTCGAT GA
|
|---|
| Protein sequence | MRRLLFLGIT IILLGLALAF WYREGKRISS TPGTQELTVL LPSPRVEFLP LYWAAASGEA
EKEGLVLKLL PSASPSPGEK TLAALTAEEA LCGRTLEGKK WKVVALLSEK ELAWLAGRQP
FRWEDLPGKK VITPAAEQGL TAAFEEVLRE QGWRPHRDLI LITNLPPHLR LPAFAAGVGD
LLLTPDPLIL SGRFRFSSLP LSLPPFPRWV LVAEEGRVPE KAVLALGRAL EASQAKLYSL
PPQEIAGETA VFFPQLSLEV LTRAIDRAQR ERIWKAGELP HPQAFARLQE ILKRAGELPR
PLDYQELFFT PAPRPLREEG NRAGGSASAA PRR
|
|---|
| |