| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0467 |
|---|
| Symbol | |
|---|
| ID | 8490438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 482654 |
|---|
| End bp | 483788 |
|---|
| Gene Length | 1135 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358492 |
|---|
| Product | PE-PGRS family protein |
|---|
| Protein accession | YP_003238468 |
|---|
| Protein GI | 260892371 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACCG AGTTAGAGAG GGAGCTCGAG GTGCTGGCTG AAAGGCTTAA GTACCTCGAG
GACTCCCTTT GACCTTGCCC AGAAAGAAAA GCGTTTGGCT CTTCTGGAAA AGGAAATGGA
GGCGCCTGAT TTCTGGCGCG ATCTCGCCCG GGCCCAGGCG GTGACGCAGG AGGTAGCCTC
CCTGCGCCAG TGCCTCGGTC GTTTCTACCG CTTGCGGGAG GGGCACGAGG AGCTTTCTGT
GCTCCTGGAG CTGGCAGCGG AGGAAGGAGA CGCCCAAGTT CTGGCAGAAC TGGCCCAGGA
TGTAAAAAAA CTGGCCGGCG AGATCGAAGA CTTAGAAGTG GAGCTGCTCC TTTCCGGGCC
TTACGATGCT TCCAACGCCA TTGTTTCCCT GCACGCCGGG GCCGGAGGGA CCGACGCTCA
GGACTGGGTG GCCATGCTCC TGCGCATGTA CGCCCGCTGG GCCGAGGCGC ACGGCTACCG
CATACGGACC CTGGATCTCC TGACCGGGGA GGAAGCAGGG ATAAAGAGCG TCACTTTTGA
GGTTATAGGT CCCAGAGCCT ACGGCTACCT CAAGGCAGAA AGGGGAGTGC ACCGGCTGAT
CCGCATCTCC CCCTTCGACG CCAGCGGCCG ACGACACACT TCTTTTGCCT CGGTGGATGT
CTTGCCGGCG GTCAAGGACG ACACGGAGAT AAAGATAGCG CCGGAGGAGT TGCGGATCGA
CACCTTCCGG GCCAGCGGTG CCGGCGGCCA GCACGTGAAC AAGACGGAGA CGGCGGTCAG
GATCACCCAC CTGCCGACGG GGATAACGGT TACCTGCCAG AGCGAGCGTT CGCAGTCGGC
CAACAAGGCG GCAGCCATGG AGATCTTGCG CGCCCGCCTT TTGGACCTGA AGATAAAGGA
GCGCGAGAAG GAATTGGCAG CCCTGCGGGG GGAAGTGAAG GAAATCGCGT GGGGTAACCA
GATTCGCACC TACGTCCTTC ATCCTTACAC CTTGGTCAAG GACCACCGTA CCGGCGTGGA
GCGGCGCGAC ATCCAGGCGG TGCTCGACGG GGACATTGAC GATTTCATCC GGGCTTACTT
AAAAGTGGAG GCCCGGAAGC AGGCCGAGGC GGCCAAGGCA GCAGGAATGA GATAG
|
|---|
| Protein sequence | MVTELERELE VLAERLKYLE DSLDLAQKEK RLALLEKEME APDFWRDLAR AQAVTQEVAS
LRQCLGRFYR LREGHEELSV LLELAAEEGD AQVLAELAQD VKKLAGEIED LEVELLLSGP
YDASNAIVSL HAGAGGTDAQ DWVAMLLRMY ARWAEAHGYR IRTLDLLTGE EAGIKSVTFE
VIGPRAYGYL KAERGVHRLI RISPFDASGR RHTSFASVDV LPAVKDDTEI KIAPEELRID
TFRASGAGGQ HVNKTETAVR ITHLPTGITV TCQSERSQSA NKAAAMEILR ARLLDLKIKE
REKELAALRG EVKEIAWGNQ IRTYVLHPYT LVKDHRTGVE RRDIQAVLDG DIDDFIRAYL
KVEARKQAEA AKAAGMR
|
|---|
| |