| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0461 |
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| Symbol | |
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| ID | 8490432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 475059 |
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| End bp | 476831 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646358487 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003238463 |
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| Protein GI | 260892366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTTTTG CTGGCAGGGT AAATACCTTT TTTGTCGAAA TTTTTCCGTG GTGGGTTGGT
ATGCGGGGGC GGCGCTGGCT CTTCGTCCTT TACGTCTGGG GGGTTGTGGG TACCGGGGCT
TGGCTTTTGG TTCGCACAGC CAAAAGCCTT AACCAGGACC TGGTGGTAGG GCTTTTCTTT
TTACTACTCC TGTGGTTGGC GGCGGAAAGC CTGGGGGTTC CCGTCCCCGG TGGGCGCCTG
ACCGCCACCT GGGCTTTGGC TTTGGCTTCC TTTTTTGCCG GCGGGCTGCC GGCCGTCCTA
TGGCTGGGCG GGTTGGCCAC TCTTCTGGGT CACCGTTTGA CCTGCGGGGA AAGCTGGCGT
ACCACGCTTT TCAACGCCGG GCAGGTTATC CTCTCTTTCT TCTTGGCCTT CCAGGTCTTC
CGGTGGGCGG GGGGTGCCGA ACGCCCGCTT TTAAGCCTGC ACCATTTCCC TGCCGTTTTC
CTTTTTACCC TTGCTTACTT TACCTTCAAC CACCTCCTTG TAGGGTTTTA CTGCCGCTGG
GGACGCCGTA GTCTTTCCGG TTCCTGGCGG GAAGTGCTTT ACTGGGACGC CCTTTCCTAC
CTCTTCACCC TTCCAGTAGG TTACGTCATG GCGGTGCTCT GGAGCCGGAT AAGCTTCTGG
CTGGTTCCGT TGGTGTTCCT GTCCATACTG GCCTTCCAGG TTTTGCTCCG CTGGTGTCTT
GCCTGTCAGC AGCAGTACCG GGAGTTTGTC TTACTGCGCC GGTTGACGGA GGGTTTAAAG
GAGAAGCGAT CGGCCGAAGA AGCCTGCGCT TACGCCTTAG AGCTTTTGCA GCCGGTCCTT
CCTTTCCGCA CTGGAGCGGT ATGGGTGCGC TGGCAAGAAC ACGGCCCTTT TGTCTGGGTG
GCCGGGGTGG GACCTTTATG CTCCTTAGCC CAGCCCATAA AGTTCCGGCC GGGTGAGGGT
TTTTTAGGGG AGGCGGTAGC CCTGGGCGAG CCGGTGGCGA CAAGCGATGC TCAGAACGAC
CCGCGCTTGC GCCAGGAGGA AGATTTTTTT CGCGCTGAGC GGGTGGCCTT GGGCTTCCCT
TTGCAGGCAG GAGGGGAAGC AGTAGGGGTG CTCTTCCTGG GAGGAAGGGA CTTATTCCTC
CTCTCTCCTC AGGCCTTTTC GCTTCTAAGC CTGGTGGCCG ACCGGCTGGC TTTGACTTTG
GCCCAGTTCG TCTGGTGGCA AAGGTGGTAC CGCACAGCTA GGAGTGACTC TATGCTGGAG
GAGGTTTTGA ACCGCCGCTT CTTTCTCGAG TACTTGCGGG AGGAGTGCCG GCGAGCGGCC
GAGGGGAACG AGCCGGCGGC GCTGTTGCTC ATAGATGTAG ACTCCTTACG CTCGCTCAAC
TGCCACTACG GCCCTCTGGT GGGGGACGCC ATTTTGCGGG AATTGGGCCG GCTCATACGC
CAGGTGGTGG GATCCGGCAG TGTGGTGGCC CGGTACGGGG GAGACTGTTT CGCTGTGTGG
CTTAGGGGGG CGGCGGAGAA GGTGGCTTGG GAGACGGCGG AGAAAATAAG GCAAGAGGTG
GAGAAAAGGC ATTTCGCCGT GGAAGGCAGT TTTTCTCCCT TGCGTTTGCG GGTAAGTGGG
GCGGTGGCGG TGTTCCCGGC GGACGGGGGA GATCTCAATA CCCTCCTGCA CAAGGCGGAG
AAAGCCCTAG CGGAGGCCAA AGCGCGCGGG GGCAACCAGG TGGTGGCAGC CACAGGAATA
AGGGGGGTGA AGTTTTTTTA TCGGTGGGAA TGA
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| Protein sequence | MLFAGRVNTF FVEIFPWWVG MRGRRWLFVL YVWGVVGTGA WLLVRTAKSL NQDLVVGLFF
LLLLWLAAES LGVPVPGGRL TATWALALAS FFAGGLPAVL WLGGLATLLG HRLTCGESWR
TTLFNAGQVI LSFFLAFQVF RWAGGAERPL LSLHHFPAVF LFTLAYFTFN HLLVGFYCRW
GRRSLSGSWR EVLYWDALSY LFTLPVGYVM AVLWSRISFW LVPLVFLSIL AFQVLLRWCL
ACQQQYREFV LLRRLTEGLK EKRSAEEACA YALELLQPVL PFRTGAVWVR WQEHGPFVWV
AGVGPLCSLA QPIKFRPGEG FLGEAVALGE PVATSDAQND PRLRQEEDFF RAERVALGFP
LQAGGEAVGV LFLGGRDLFL LSPQAFSLLS LVADRLALTL AQFVWWQRWY RTARSDSMLE
EVLNRRFFLE YLREECRRAA EGNEPAALLL IDVDSLRSLN CHYGPLVGDA ILRELGRLIR
QVVGSGSVVA RYGGDCFAVW LRGAAEKVAW ETAEKIRQEV EKRHFAVEGS FSPLRLRVSG
AVAVFPADGG DLNTLLHKAE KALAEAKARG GNQVVAATGI RGVKFFYRWE
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