Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0434 |
Symbol | |
ID | 8490405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 443816 |
End bp | 447235 |
Gene Length | 3420 bp |
Protein Length | 1139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646358461 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_003238437 |
Protein GI | 260892340 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACTTTG TGCACTTGCA CCTGCATACC GAATACAGCC TGCTCGACGG TGCTGCCCGG ATAAAGGATG TGGTGAAGCG GGCTAAGGAG CTAGGGCAGA ACGCCTTGGC CATAACCGAT CACGGGGTCA TGTACGGCGT GGTGGACTTT TACAAAGCCT GCCAGGAAGT GGGAATAAAG CCCATCTTGG GGTGCGAAGT TTACGTGGCT CCGCGCGGCA TGACCGACCG GACACCCAAG GTGGACGACA ATCCCTACCA CCTGGTCCTC TTGGCCGAGA ACGAAGAAGG TTACCGCAAC CTCATAGAAC TAGTTTCGCG CGCATTCTTG GAGGGCTTTT ATTATAAGCC GCGGGTGGAC AAGTACCTGC TGGCCCAGAA GGCCAAGGGC CTAATTGCGC TGTCGGCCTG CCTGGCCGGA GAGGTAGCCG CGCACCTACT CGCTGGAGAC TTCAAGAAGG CAGAGGAGGC GGCAGGGGAG TACCGGGACA TCTTTGGGAA GGACAACTTT TTCCTAGAGC TCCAGGACCA CGGACTGCCC GAACAGAAGC CAGTTAACGA GGGACTGATA AAGCTGGCCT CCCGGCTCGA TATCCCCCTT GTGGCCACTA ACGACGTCCA CTACGTGGAG AGGGCGGATG CCGAAGTACA AGATTTGCTC CTTTGCATCC AGACCGGGAA GAGCGTGGGC GATCCCGACC GCCTGCGTTT TGGCTCAGAC CAGTTCTACC TCAAATCGGC CTTAGAAATG GCCCGGCTCT TCCCCGATCA CCCCGACGCC CTACGAGCTA CGGTGGAGAT AGCTTCCCGC TGCGAAGTGA AGCTTTCTTT CGGCGAGTAC CACCTGCCCG AGTTTCCCGT ACCCGAAGGG CACACCCCGG CTTCCTACCT GCGGGAGCTC TGCTACGCTG GGGCAAAGAA ACGTTACGGC GATCCTTTGC CCCCGGAAGT GGAGGAGAGG CTGGCCTACG AGCTCCAGGT CATAGAGCGC ATGGGCTATC CCCCTTACTT TCTCATCGTC TGGGACGTGA TTCACTTCGC CCGGCGCAAC GGTATCATGG TGGGGCCGGG CAGGGGGTCG GCGGCAGGAA GCCTGGTGGC CTACTGCCTG GGCATAACCA ATATAGACCC TTTGAAGTAC GGGTTGCTCT TCGAGCGCTT CCTCAATCCT GAACGGGTGT CCTTGCCCGA CATCGATACC GACTTCTGCT TCGAGATGCG AGACAAGGTT CTGGAGTACG TGGTGCGGCG CTACGGCGCC GATCGCGTGG CCCAGATAGC TACCTTCGCC CAGCTATCGG CCCGGGCGGC CATAAGGGAT GCCGGCCGGG CGCTGGGAAT GTCCTACGCC GAGGTGGACC GCGTGGCCCG CCTGGTGCCG GGAGAGCCGG GAATGACTGT TGCCCGCGCC CTGGAGGAAT CGCCGGAGCT CAAAGAGCTC TACGAGAAGG AGGCCTCGGT AAAGAAGCTG CTGGATGTGG CAGCCAAGCT AGAGGGGATT CCCCGCCACG CTTCTACCCA CGCCGCCGGG GTGGTGATAA CCCCTGAACC TTTGATCCGC CTGGTTCCCC TGCACCGGAT GCCTGATGGC ACAGTAGCCA CGCAGTTTAC CAAAGAGGGA GTAGAAGAGC TCGGGCTTTT GAAGATGGAC CTTTTGGGGC TGCGTACCCT CACCGTCATA CGCGACACCC TGCGGCATGT CAACCGCCGG GGGGTAAAAC TTGATCTGGA GAAAATCCCC TTGGACGACC CGGCCACCTT CGAGCTTCTG TGCCGGGGAG ACACTATCGG TGTTTTTCAG TTGGAGTCGA GCGGCATGCG CGCTCTCTTG CGCTCTCTCC AGCCTTCCTG CTTCGAGGAT TTGATTGCTC TGGTGGCCCT TTACCGCCCT GGTCCCCTGG GAAGTGGAAT GGTGGATGAC TTCATTAAGC GCAAGCATGG TCTTCTACCG ATTGAGTATC CCCATCCCTG GCTGGAGCCC ATACTGCGGG AGACTTACGG GGTCATCGTT TACCAGGAGC AGGTGATGCA GATAGCCAGC CGGCTGGCGG GTTTCAGCCT GGGCGAGGCC GACCTTTTGC GCCGGGCCAT GGGGAAAAAG AAGCCGGAGG AGTTGGCCGC TTTACGCTCG CGCTTCGTGA AAGGTAGCGT AGAGCGGGGG GTGGACGAGC GGCTGGCGGA GGAAATTTTC GACCGCATGG AGTACTTCGC CGGCTACGGC TTTAACAAGA GCCACTCGGC TGCCTACGCC CTGGTGGCCT ACCAGACTGC CTACCTCAAG GCTAACTACC CAGTGGAGTA CATGGCGGCG CTTTTGACCT CGGTGCGCGA CCGGACGGAG AAAGTTGCCC TCTATGTGGA AGAGTGCCGA CGGCTGGGGA TAAAGATCTT CCCCCCCGAC ATCAACGAAA GCGAGCGCGA TTTCAGCCCC ACTCCTGACG GGGGCATAAG GTTCGGGCTG GCGGCGGTAA AGAACGTGGG GGAGGGTGCG GTGGAAGCCA TCCTTCAAGC TCGGAGGGAG GGCGGTCCTT TCCGGGATTT TGCCGACTTC TGTGCCCGGG TGGGTGGTAG GGCTCTGAAC CGGAAGGTGC TGGAAAGTTT GGCCAAGGCG GGAGCTTTTG CCTCCCTGGG GCATACGCGG AAAGAGATTT TGGAAAGCAT AGATGAGGGG CTGAAAATCG CCAACCGGGC CAAGGCTAAG AAGCAGCAGG GTATTCAGAT ATGCCTTTTC CAAAATATGG AGGATTTTGG CGGAGGGTAC CGGCTGAAGT TCAACCGGCC CAACGGGGAA GAATTCCCCC GCCGCGAACT TTTGCGCATG GAAAAAGAAC TTCTGGGGCT TTACATAAGC GGGCACCCCT TGGCCGAGTA CCGCGATCTC CTGCGCCTCT TGACCGACGT GCAGGTGGCC GACCTGGCGG AGATGGAGGA AGACGCGGAG GTCAAGGTAG GCGGGATGAT CGTGGGGATG AAGCGCCTGC GCACGCGGCG GGGCGAGCCC ATGGCCGCTG TTTACCTAGA GGACCTGACC GGGGTAGTGG AGGCGGTGCT CTTCCCCCGG GTCTATCAGG AGTGCCGCGC CTGTCTCCGG CCAGAAACGG TGGTGCTGGT GCAGGGGAAA AAAGGAGGAA GTGAAGGGGA GCGGCTACGC TTGGTGGTAG ATGAGATGCG CGTGCTCGAT CCGGGAAGTG CGCAGTTGGT CCTGTACCTT CCTCACAAAG AGAGTAGCCT CTTGGGGGAA CTGAAGGAGG TGCTGCGGCG TTACCGGGGT TCCTGCCCGG TCTATCTACG CCTGCCGGGA GAAAGTGCTT TGCGGCGGGT TCCCCAGGAT TACTGGATCA ATATCCTTTC GCCGGCTTTA GGTTGCCTGA TCTCTCTGGT AGGAGAAGGG AATATAAAAA TTTTGTGGAA TAAAAGGTAA
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Protein sequence | MDFVHLHLHT EYSLLDGAAR IKDVVKRAKE LGQNALAITD HGVMYGVVDF YKACQEVGIK PILGCEVYVA PRGMTDRTPK VDDNPYHLVL LAENEEGYRN LIELVSRAFL EGFYYKPRVD KYLLAQKAKG LIALSACLAG EVAAHLLAGD FKKAEEAAGE YRDIFGKDNF FLELQDHGLP EQKPVNEGLI KLASRLDIPL VATNDVHYVE RADAEVQDLL LCIQTGKSVG DPDRLRFGSD QFYLKSALEM ARLFPDHPDA LRATVEIASR CEVKLSFGEY HLPEFPVPEG HTPASYLREL CYAGAKKRYG DPLPPEVEER LAYELQVIER MGYPPYFLIV WDVIHFARRN GIMVGPGRGS AAGSLVAYCL GITNIDPLKY GLLFERFLNP ERVSLPDIDT DFCFEMRDKV LEYVVRRYGA DRVAQIATFA QLSARAAIRD AGRALGMSYA EVDRVARLVP GEPGMTVARA LEESPELKEL YEKEASVKKL LDVAAKLEGI PRHASTHAAG VVITPEPLIR LVPLHRMPDG TVATQFTKEG VEELGLLKMD LLGLRTLTVI RDTLRHVNRR GVKLDLEKIP LDDPATFELL CRGDTIGVFQ LESSGMRALL RSLQPSCFED LIALVALYRP GPLGSGMVDD FIKRKHGLLP IEYPHPWLEP ILRETYGVIV YQEQVMQIAS RLAGFSLGEA DLLRRAMGKK KPEELAALRS RFVKGSVERG VDERLAEEIF DRMEYFAGYG FNKSHSAAYA LVAYQTAYLK ANYPVEYMAA LLTSVRDRTE KVALYVEECR RLGIKIFPPD INESERDFSP TPDGGIRFGL AAVKNVGEGA VEAILQARRE GGPFRDFADF CARVGGRALN RKVLESLAKA GAFASLGHTR KEILESIDEG LKIANRAKAK KQQGIQICLF QNMEDFGGGY RLKFNRPNGE EFPRRELLRM EKELLGLYIS GHPLAEYRDL LRLLTDVQVA DLAEMEEDAE VKVGGMIVGM KRLRTRRGEP MAAVYLEDLT GVVEAVLFPR VYQECRACLR PETVVLVQGK KGGSEGERLR LVVDEMRVLD PGSAQLVLYL PHKESSLLGE LKEVLRRYRG SCPVYLRLPG ESALRRVPQD YWINILSPAL GCLISLVGEG NIKILWNKR
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