| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0405 |
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| Symbol | |
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| ID | 8490371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 415046 |
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| End bp | 415810 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646358427 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003238408 |
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| Protein GI | 260892311 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0083776 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAGA AGGAAGGCGG CGCGGAGCTC GTCTACGGAC GTCACGCGGT AAAAGAAGCT
TTGCTAGCAG GACGCTCCTT ATATAAAATA CTGGTAGCGC GGGGGCTAGG CGGCGCTTTT
TTCCATGAAC TTAGGAGCCT GGCCGCCTCG CGAAGCGTGC CGGTGCAGAT AGTTCCTGCC
GAGGCCCTGG ATCGCCTAAC GGCCCGTGGC GTCCACCAGG GGTGCGTAGC TCTAGTAAGC
CCTTATAATT ATGCGAGTCT GGATGAGATA CTGGCCACTC ATCCTTCTTG CCTTTTGGTT
TTGGCCTACA TCACTGATCC GCGCAACCTA GGAGCCATAC TGCGCACAGC GGCCGCCGTA
GGCGTAGAGG GTGTGATAAT TCCTTCGCGC CGGGCGGCAG GTCTTACTGC GGAAGCGCTC
AAGGCGTCGG CAGGAGGGGC AGAGCACGTC AAGGTGGCCA GGGTGACCAA CCTGGCCCAA
ACCTTGCGTT ACTTGAAGGA GCAAGGCTTC TGGGTCCTGG GGGCGGAGGC TGACGCTAAG
GTCTCCCTCT GGGAAGCGGA GTGGAACGAG CCCCTGGTGG TGGTCATTGG GGGAGAGGAC
ACGGGCTTGG GGAAAGTAGT GCGACGCGAA TGCGACGTCT TAGTGCGTAT ACCTACCACG
GCAAAAATGC CTTGTCTTAA CGCTTCGGTG GCGGCAGCAG TGATCCTCTA CGAGGTCTTG
CGCCGCCAGA TGAAAGGGAA AAATGCAGGA GATAACCTTG ATTGA
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| Protein sequence | MDKKEGGAEL VYGRHAVKEA LLAGRSLYKI LVARGLGGAF FHELRSLAAS RSVPVQIVPA
EALDRLTARG VHQGCVALVS PYNYASLDEI LATHPSCLLV LAYITDPRNL GAILRTAAAV
GVEGVIIPSR RAAGLTAEAL KASAGGAEHV KVARVTNLAQ TLRYLKEQGF WVLGAEADAK
VSLWEAEWNE PLVVVIGGED TGLGKVVRRE CDVLVRIPTT AKMPCLNASV AAAVILYEVL
RRQMKGKNAG DNLD
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