Gene Adeg_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0400 
Symbol 
ID8490366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp409962 
End bp411071 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content59% 
IMG OID646358422 
ProductPilT protein domain protein 
Protein accessionYP_003238403 
Protein GI260892306 
COG category[R] General function prediction only 
COG ID[COG4956] Integral membrane protein (PIN domain superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000234721 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGGA GAGTAGCCTT TTTTATTTTG ACCCTGGCTT TCGGTGCTGG CGGGGCGCTT 
TTAGCCTTTT TTCTCTTAAA TTTCTGGGCT CTTCCGCTTA TCTGGCGCAT CGGCGTGGTA
GTGGCGGGAG GGATCGTCGG TTTCCTGGTA GGCATGCTCT TATCCCCCCG GCTGATAGAA
GCAGTGGTGT GGCTCACCTC CCGCTGGGAA CAGTACCTGC AGCGCATGCC CCTTTCGGAC
TTGTTGGCCG GGATAGTAGG ACTCGTTCTA GGACTTCTCA TCACCAATCT TTTTGCCCCG
GTGCTGAGTG CCCTGGGTTG GGCGGGCAAG ATTATCTGGC TCGGTGCCGC TGGGCTTACC
GGTTATCTGG GCTTTTCTTT AGGAGTCAAG AAAAGGGAAG AGTTCTGGGG CCTCATTTCC
TCTCTCCCGC GCCCGGGCAA AGAGAAAGGC GGCAAGGCTT CAGTAGGGTC CGGTTCTCTT
AAGCTCCTGG ACACCAGCGC CATAATCGAC GGGCGCATAG CGGACCTCTG TGCCAGCGGC
TTCTTAGAGG GGACCCTGGT GGTTCCCGTG TTCGTGCTGG AGGAGCTGCA GCACATTGCC
GATTCGGGGG ACACGCTCAG GCGCAATCGG GGCCGGCGGG GACTGGACAT CCTGAACCGG
ATCAAGAAGG AAACTGGGGT TAAAGTGCAA ATATGCGACC AGGCGGTGGA CGGGGGAGAA
GGGCTACCGG TTGACGCCAA GCTCGTGCGC CTGGCCAAAA AGCTGGGGGC CAAGCTGGTG
ACCACCGACT ACAACCTGCA CAAGGTGGCG GAGTTGCAGG GAGTCAAAGT GCTGAACATC
AACGAGCTGG CCCAAGCTCT GCGTCCCGTA GTCTTGCCCG GCGAAGAAAT GTCGATTCAT
CTGGTGAAAG ATGGCAAAGA GCCGGGCCAA GGGGTGGGCT ACCTCGAGGA CGGGACGATG
GTGGTGGTGG AAGGAGGAAA AAAGTACATA GGGCAGACGA TCCGCGTTAC CGTCACCAGC
GTGCTGCAAA CGTCGGCCGG GCGGATGATC TTTGCCAAGC CGAAGGCCGA GGGGGAGGTG
GGGCTTGGCG GGGTGAATGC CATTGGTTGA
 
Protein sequence
MARRVAFFIL TLAFGAGGAL LAFFLLNFWA LPLIWRIGVV VAGGIVGFLV GMLLSPRLIE 
AVVWLTSRWE QYLQRMPLSD LLAGIVGLVL GLLITNLFAP VLSALGWAGK IIWLGAAGLT
GYLGFSLGVK KREEFWGLIS SLPRPGKEKG GKASVGSGSL KLLDTSAIID GRIADLCASG
FLEGTLVVPV FVLEELQHIA DSGDTLRRNR GRRGLDILNR IKKETGVKVQ ICDQAVDGGE
GLPVDAKLVR LAKKLGAKLV TTDYNLHKVA ELQGVKVLNI NELAQALRPV VLPGEEMSIH
LVKDGKEPGQ GVGYLEDGTM VVVEGGKKYI GQTIRVTVTS VLQTSAGRMI FAKPKAEGEV
GLGGVNAIG