Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0393 |
Symbol | |
ID | 8490359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 402151 |
End bp | 402873 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646358415 |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_003238396 |
Protein GI | 260892299 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0160174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGCT TGATCCCACC CTACTGCGAG CTTAAAGGTG AGGAGATTGT TGCCGGATTG CGGGGGATAG CGGTTGACCC CCGCGATTTC GTGGCTTACT GGGTTTATCT TTCTACCCGT GACCCTTTTG CGGTCCTGGT GGCCACCCTT CTGAGCCAGC ACTCTACTGA CCGCAAGGCC CTTGAGGTTT ACCGCCGGCT CGTTCAGGTC GTTAAAAACC TTTCCCCTGC CTCCTTCCTT AATTGCGAGG AGCAGGAATT GGCCGAAATC TTGCGCCCGG TGGGGCTGCA CCGGCGCAAG GCGAAGCTTC TACGCACTTT GGCTCGGGAG GTAGTCGATT TCGACCTTAA AGCCCTTAGC AATCTTCCCA CCTTCGAGGC CCGCCAGCGG CTTTTAAGGC TCCCCGGCGT GGGACCCAAG ACGGCGGACG TCCTGCTTCT GCACCTTGGA CACCCCCTTT TCCCGGTGGA CACCCACATT GCCCGTATAA CTTGGCGGCT TTCCTGGGCC AAGAGACCGT GCTACGAGGA GATACAAAAG GTCTGGATGG AGCTCTTTTC TCCTGAAGAT TACCAGGAAG CCCATCTGCG CCTCATCCAG TGGGGTCGGG AGATCTGCCA GGCCAGAAAA CCACGCTGTT TTACCTGTTT TTTGAGAATA TGTTGCTCTT TTGCGAAAGA GGGGGGCGGA CTTAAAAACA GCTTTTGGTA TAATGGGGGT TAG
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Protein sequence | MSSLIPPYCE LKGEEIVAGL RGIAVDPRDF VAYWVYLSTR DPFAVLVATL LSQHSTDRKA LEVYRRLVQV VKNLSPASFL NCEEQELAEI LRPVGLHRRK AKLLRTLARE VVDFDLKALS NLPTFEARQR LLRLPGVGPK TADVLLLHLG HPLFPVDTHI ARITWRLSWA KRPCYEEIQK VWMELFSPED YQEAHLRLIQ WGREICQARK PRCFTCFLRI CCSFAKEGGG LKNSFWYNGG
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