| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0336 |
|---|
| Symbol | |
|---|
| ID | 8490301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 334764 |
|---|
| End bp | 336971 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646358365 |
|---|
| Product | bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta |
|---|
| Protein accession | YP_003238347 |
|---|
| Protein GI | 260892250 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1614] CO dehydrogenase/acetyl-CoA synthase beta subunit |
|---|
| TIGRFAM ID | [TIGR00316] CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTAGGA TAATTGCTGC GGCGGCTATA AGAGGAGCAC ACAAGATAGT ATCCCGGGCG
GAGGAGGCCC TGAAGGAGGC CCTGGCGAAG TACGGGCCGG ATCATCCCGT CGCCTTTCCC
AACACCGGCT ATTACCTCCC GGTCATCTAC GGCATCACCG GCATCGCCGT GGAAAAGATC
GGGGACATGA TCCCGGTGCT GGAGCAGGCC AAGGCTCTCT TGCCGCCGGA GCCCGAACCC
AGACTGTGGC TTCCTTACCT CGGCCCGGCT TTGGATGCAG GCATGGCCAC CCTCTTCGCC
GATGAGATAA TCGAGGCGCT TAAATACCTA GAGGATCCTC CTCCCTATAC CATGACTTCC
GCGCCGGTCA ACGGCAACAT CTGGCTGGGA GCGGCCGACG ATGCTATCTT GCGCAAAAGG
GGCATCGAGT TCGTGGACGG GACGGCGCCG GGATTTGCGG CCATTATAGG GGCAGCTCCC
ACCAACGAGA TTGCGGTCAA GATCGCCCGG GAACTGCAGG AAAAAAGCCT TTACGTCTTC
ATGTCTGCTT CTACCGACGG CAAGAGCATG GCCGAGCAAC TGGCCGAAGA AGGGGTGGAG
CTCGGCTGGG AGACCAGACT AGTCCCCTTC GGCAAGGATA TCACGGCCAC GGTCTTCTCT
TTGGGCTTTG CCACCCGCGT GGCCTTGTCC TTCGGTAACG TCAAGCCGGG GGACTTCCGG
CGGGTGCTAC TTTATAACAA GAACCGGGTC TTTGCCTTTG TCATCGCCCT GGGGCACGTC
GACGACGAGA AGTACGCCCA GGCGGCGGGG GCTATCAACT TCGGCTTCCC CACCATCGCC
GACACCGACA TCCCCCAGAT ACTCCCCTAC GGGATCTGTA CCTACGAGCA CGTAGTCTCC
AACGTGTCCC ACGACAAGAT TGTGAGCCGG GCCATCGAGG TGCGGGGGCT CAAGATCACC
GTTACCAAGG TACCGGTGCC AGTGGCCTAC GGCCCTGCCT TCGAAGGGGA AAGCGTGCGC
AAGGGAGACA TGCACGTGGA GTTCGGCGGC CAGCGCACTC CTGCCTTTGA ACTGGTGCGC
ATGCGGGAGG CCCACGAGGT GGAGGACGGG AAGATCGAGG TCATAGGCCC GGACGTGGAC
TCCGTGCCGG AGGGCGGGAG GCTGCCTTTG GGCATCGTGG TGGACGTCTA CGGGCGCAAG
ATGCAGGAGG ACTTCGAGCC GGTGATCGAG CGGCGCTTTC ACTACTTCAT CAACTACGCC
CAAGGCGTGT GGCACATGGG CCAGCGGGAC ATCATCTGGG TGCGCATATC TAAGGCGGCC
TTCAAGGCCG GTTTCCGGGT GCGGCACTTT GGTGATATAC TGTACGCCAA AATCAAGTCG
GAGTTCGCCA ACGTTATCGA CCGCGTCCAG GTGACCATCT ACACCGACGA AGAGAAGGTT
CTGGCCCTGC GCGAGGAGGC GCGGCAGGCC TACGCCCGGC GCGACGCCAG GCTCAAAGAG
CTTAGCGACG AGGCGGTGGA CACCTTCTAC TCCTGCACCC TGTGCCAGAC CTTCGCCCCC
ACCCACGTCT GCATCGTTCT GCCGGAGCGG GTGGGGCTGT GCGGGGCGGT GAGCTGGCTT
GACGCCAAGG CTGCTTACGA GATCAACCCC CACGGCTGCA ACCAGCCGGT GCCCAAGAAG
GGGGTCATCG ACGAGTGGAA GGGGCAGTGG GAGTCCTGCA ACCAGTTCAT CTACGAGCAC
TCGCGGGGGA CCATCGAGCG GGTAAACTTC TACACCATCA TGGAGTACCC CTTGACTTCC
TGCGGGTGCT TTGAGGCCAT CATGGTCATC CTGCCCGAGT GCAACGGCTT CATGATCGTC
AACCGGGAGT ACTCCGGCAT GACCCCCTGC GGCATGACTT TCTCCACCCT GGCCGGCAGC
GTGGGCGGCG GGGTGCAGAC GCCGGGCTTC ATGGGCATAG GCAAGGCTTA CTTGGCCTCC
AAGAAGTTCG TGCGCGCCGA CGGGGGCTTA GCGCGGGTAG TCTGGATGCC GAAGGAGTTT
AAAGAGCAGA TGCGGCCGGT GCTGGAGGAG AGAGCCGAGG AGGAGGGCCT GGGGAGGGAC
TTCGTGGACA AAATCGCCGA CGAAACCGTG GGGGTCACCA CGGAGGAGAT CCTTCCCTTC
CTGGAGGAGA AAGGTCATCC GGCCCTGACC ATGGATCCCC TCTTTTAA
|
|---|
| Protein sequence | MSRIIAAAAI RGAHKIVSRA EEALKEALAK YGPDHPVAFP NTGYYLPVIY GITGIAVEKI
GDMIPVLEQA KALLPPEPEP RLWLPYLGPA LDAGMATLFA DEIIEALKYL EDPPPYTMTS
APVNGNIWLG AADDAILRKR GIEFVDGTAP GFAAIIGAAP TNEIAVKIAR ELQEKSLYVF
MSASTDGKSM AEQLAEEGVE LGWETRLVPF GKDITATVFS LGFATRVALS FGNVKPGDFR
RVLLYNKNRV FAFVIALGHV DDEKYAQAAG AINFGFPTIA DTDIPQILPY GICTYEHVVS
NVSHDKIVSR AIEVRGLKIT VTKVPVPVAY GPAFEGESVR KGDMHVEFGG QRTPAFELVR
MREAHEVEDG KIEVIGPDVD SVPEGGRLPL GIVVDVYGRK MQEDFEPVIE RRFHYFINYA
QGVWHMGQRD IIWVRISKAA FKAGFRVRHF GDILYAKIKS EFANVIDRVQ VTIYTDEEKV
LALREEARQA YARRDARLKE LSDEAVDTFY SCTLCQTFAP THVCIVLPER VGLCGAVSWL
DAKAAYEINP HGCNQPVPKK GVIDEWKGQW ESCNQFIYEH SRGTIERVNF YTIMEYPLTS
CGCFEAIMVI LPECNGFMIV NREYSGMTPC GMTFSTLAGS VGGGVQTPGF MGIGKAYLAS
KKFVRADGGL ARVVWMPKEF KEQMRPVLEE RAEEEGLGRD FVDKIADETV GVTTEEILPF
LEEKGHPALT MDPLF
|
|---|
| |