| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0316 |
|---|
| Symbol | |
|---|
| ID | 8490281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 312872 |
|---|
| End bp | 313618 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646358347 |
|---|
| Product | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| Protein accession | YP_003238329 |
|---|
| Protein GI | 260892232 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTGA TACCGGCCAT AGATCTCAAA GGAGGCTGCT GCGTCCGGCT GGTGGAAGGA
AAGGCCACGC TTGAGGTGGT CTACTCTTCC GACCCGGTAG AGGTGGCCCT CGGCTTCGAG
GCAGCGGGGG CCAAGTGGCT GCACGTGGTG GACTTAGACG GCGCCTTCCG GGGGGAACCC
GCTAACCTAG ACGCGATAGC CGCGATTATC CGCGCGGTGG GCATACCCGT GCAGGTGGGA
GGAGGAATAA GGAGCCGGGA AACGGCGGAG AAGATTTTTG CCCTGGGGGC AGCCCGCATC
ATCCTGGGCA CGGCCGCAGT CATGGAAAAA GAGCTTTTGA AGGAGCTTCT TGACTCTTTC
GGGAAAGACC GGGTGGCGGT CAGCGTGGAC GCCCGTGAGG GGAAGGTGGC CGTTAAAGGA
TGGGAAGAAG TCACCCTGGT AGACGCCCTG ACCTTCGGCC GGGAACTTAG GTCTCTGGGA
GTGACGTGGG TGATCTTCAC CGACATCAAG CGGGACGGCA CCCTCAAGGG GCCCAATGTG
GTGGCGGTGG CCGAGTTCGC CCGCTCGATC CCCGGGCTCA GGGTCATAGT CTCCGGCGGG
GTGAGTAGAC TGGAGGACCT TCTGAAGCTT AAGAAGCTGG CCCCTCTGGG AGTGGAAGGG
GTCATCGTGG GAAAGGCCCT TTACGACGGC AGGATCGATC TCAAAGAAGC CTTACGTTTA
GTGGAGGCAG AGGGGAATGG TGGCTAA
|
|---|
| Protein sequence | MLVIPAIDLK GGCCVRLVEG KATLEVVYSS DPVEVALGFE AAGAKWLHVV DLDGAFRGEP
ANLDAIAAII RAVGIPVQVG GGIRSRETAE KIFALGAARI ILGTAAVMEK ELLKELLDSF
GKDRVAVSVD AREGKVAVKG WEEVTLVDAL TFGRELRSLG VTWVIFTDIK RDGTLKGPNV
VAVAEFARSI PGLRVIVSGG VSRLEDLLKL KKLAPLGVEG VIVGKALYDG RIDLKEALRL
VEAEGNGG
|
|---|
| |