| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0287 |
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| Symbol | |
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| ID | 8490252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 281801 |
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| End bp | 282562 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646358319 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003238301 |
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| Protein GI | 260892204 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.129193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGGGC AGCGATTCTT AGAAGGAAAA GTAGCACTGG TGACCGGGGC CAGCCGGGGG
ATCGGGGCGG CCGTGGCCCT GGCCTTAGCC CAAAGTGGGG CAGCGGTGGC CGTGAACTTC
TGCCGCTCAG CTGCCCAGGC GGAAGAGGTG GCCCGTCGCT GCCGCGAATG GGGGGTAAAA
GCGCAAGCCT TTCGCGCCGA CGTCACCGAC CCGGAGGAGG TGCGCCGCCT GTTCGCCGCC
GTGTCCGCGG AGCTGGGGCC GGTATCCATC CTGGTGAACA ACGCGGGAAT GGGGCTGCGC
CGCCTTCTGG TGGACACCTC CGACGAAGAG TGGGAGAAGC TTTTGCGGGT CAACCTCTCG
GGTCCCTTCT ACTGCTGCCG GGAAGCCCTC CCCTTCATGA TAAGGCAGCG CTGGGGGAGG
ATCATAAACA TCGCTTCCGT CTGGGGCATC ACCGGGGCTT CTTGCGAGGC CGCCTACGCC
GCCACCAAAG GGGGGCTCAT CGCCCTCACC AAGTCTTTAG CCCGTGAGGT GGGAAGCGCG
GGAATAACGG TGAACGCCCT GGCTCCCGGC CCCATCGAGA CCGACCTTTT GCGGGAGGAG
CTTGCCCCGG AAGAACTGGC CGCCCTGGCC GAAGCCATAC CCTCCGGGCG TCTAGGTAGG
CCGGAAGAAG TGGCGGCGGC CTGCGTCTTT CTAGCCTCTC CGGCCGCCGC CTTCATCAAC
GGTCAGGTTC TGGGGCTAGA CGGGGGCTGG GCCCCCTTCT AG
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| Protein sequence | MEGQRFLEGK VALVTGASRG IGAAVALALA QSGAAVAVNF CRSAAQAEEV ARRCREWGVK
AQAFRADVTD PEEVRRLFAA VSAELGPVSI LVNNAGMGLR RLLVDTSDEE WEKLLRVNLS
GPFYCCREAL PFMIRQRWGR IINIASVWGI TGASCEAAYA ATKGGLIALT KSLAREVGSA
GITVNALAPG PIETDLLREE LAPEELAALA EAIPSGRLGR PEEVAAACVF LASPAAAFIN
GQVLGLDGGW APF
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