Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0236 |
Symbol | |
ID | 8490201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 235683 |
End bp | 236270 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646358273 |
Product | Resolvase domain protein |
Protein accession | YP_003238255 |
Protein GI | 260892158 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2452] Predicted site-specific integrase-resolvase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000223632 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGGA AATTGCTGAC CCTCAAAGAG TGCAGAGAGA TTTACGGGCT CAGCCGGGGT TCCCTCCTGA ACTACGAGAA GCAGGGACTG ATAACCCCGG CCAGAACCCC CGGCGGCGTC CGGAGGTACA AGGTAGAAGA CATCGAAAGG CTCCTAGGGC TCCTGGGAGA AAGCAGCATC CGGCTGAAGA CGGTCCTCTA CGCCAGGGTC TCTACCAGGA AGCAGGAAGC TTACCTCAAG AACCAGGTCA AGAGGCTTGA AGAGTTTGCC CGCGAAAGAG GCTGGGACTA CGAAGTGATC CAGGAGATCG CCAGCGGGGT AAACGAGAAC AGGAGGGGGC TTCAAAAGCT CCTCAACATG GTGAAGAGGG GCGAAGTGGA GAGGGTGGTG GTCGAGTGTC CCGACCGGCT GGCCCGCTTC GGCTTTGAGT ACTTAAGGAA CTTCTTTGAC GCTTTCGGCG TGGAATTGGT GGTGCTGAAC GGCGGAGAAA ACGAAGAGCA GGCGAGAGAA CTGGCGGAAG ACCTCGTCGC CATCGTCACC TCCTTTGCCG CCAAGATTTA CGGTAAAAGG GGCGGGAAGA AGAAGTGA
|
Protein sequence | MKRKLLTLKE CREIYGLSRG SLLNYEKQGL ITPARTPGGV RRYKVEDIER LLGLLGESSI RLKTVLYARV STRKQEAYLK NQVKRLEEFA RERGWDYEVI QEIASGVNEN RRGLQKLLNM VKRGEVERVV VECPDRLARF GFEYLRNFFD AFGVELVVLN GGENEEQARE LAEDLVAIVT SFAAKIYGKR GGKKK
|
| |