Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0213 |
Symbol | |
ID | 8490178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 210906 |
End bp | 211679 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646358252 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_003238234 |
Protein GI | 260892137 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00242661 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATACCGG GCAAGCTACT TGGGCCGGGA GGGGTGGGTA TCACGCGAAG GTCGGTGGCC AAACAAGCCC CCAGGTTCCT GCTTTTGGCG GTGGGGGCTT ATTTATTTCT GCTGACTTCG GTCTGCCTCT GGGAGAGAAT ATTCTTCGAT TGCCTTTCCC GTGAAGTGGG CGCCCTAGGC TCTCCCCTGG CGGGGAAGCT CATAGTGGTG GATCCGGGGC ACGGGGGCCC CGACCCCGGG GTGGTGCGCG GGGGAGTACG GGAAAAGGAC ATAACCCTGG CGGTAGCCCA GCGGCTCAGC CACTTTTTGC GACAGGCAGG GGCGGAAGTG GTTATGACGC GCGAGAAGGA TCGGGATCTA GCCGATCCCG ACCTCTGGGA TATGAAGGAG CGGAAGCGCC AAGACCTGGA GCGCCGTATA GCCTTGGCCA ACCGGCTCCG GGCCGATGCG TTTTTGAGCC TGCACGTCAA CAGTTTCGAA GAAGCGGATG AATACGGCGC CCAGACTTTT TATCAGGCCG GTTCAGAAGA AAGCCGGCGG CTGGCGGAAG CCATCCAGCA GGAGTTACAA TTCCTTTTGG GGAACACCGA ACGCCTGCCC AAGGCGGGGG ATTACCTGGT GGGAAGATTG GCCCGGATGC CGGCGGTAGT GGTGGAGATA GGCTTTCTCA CCCACCCGGA GGAAAAGAGG CTCTTGCAGG ATCCTGCCTA TCAGAGCAAG GTGGCTTTCG CCGTCTATGC CGGGCTGGCC AGGTTCTTTG CCCAGGGGAG GTGA
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Protein sequence | MIPGKLLGPG GVGITRRSVA KQAPRFLLLA VGAYLFLLTS VCLWERIFFD CLSREVGALG SPLAGKLIVV DPGHGGPDPG VVRGGVREKD ITLAVAQRLS HFLRQAGAEV VMTREKDRDL ADPDLWDMKE RKRQDLERRI ALANRLRADA FLSLHVNSFE EADEYGAQTF YQAGSEESRR LAEAIQQELQ FLLGNTERLP KAGDYLVGRL ARMPAVVVEI GFLTHPEEKR LLQDPAYQSK VAFAVYAGLA RFFAQGR
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