| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0211 |
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| Symbol | rplM |
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| ID | 8490176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 210021 |
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| End bp | 210449 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646358250 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_003238232 |
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| Protein GI | 260892135 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000131451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGACTT ATATGGCCAA GCCGAACGAG GTAGAAAGGC GCTGGTACGT CATCGACGCC
ACCGGCAAGC CTTTGGGCCG TCTAGCCAGC ATGGTGGCGC GTATCCTGCG GGGCAAGCAC
AAGCCCATTT TCACCCCGCA TGTGGACACA GGAGATCATG TTATCGTGAT CAACGCCGAG
AAAGTGGTGC TCACGGGGAG GAAGCTGGAG AAGAAGCTTT ACATCCGGCA CTCCGGCTAC
CCCGGCGGCC TTAAGGTGAT GAATTACGCG AAGCTCATGC AGACCCGGCC GGAGCGGGCC
GTGGAGAAGG CGGTCAAGGG GATGCTTCCC AAGAACCGGC TGGGAGCGCG CATGCTGCGC
CGGCTACGGG TCTACCGGGG ACCGGAGCAT CCGCACCAGG CGCAGAAGCC GGAAAAGCTG
GAGTTTTAA
|
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| Protein sequence | MRTYMAKPNE VERRWYVIDA TGKPLGRLAS MVARILRGKH KPIFTPHVDT GDHVIVINAE
KVVLTGRKLE KKLYIRHSGY PGGLKVMNYA KLMQTRPERA VEKAVKGMLP KNRLGARMLR
RLRVYRGPEH PHQAQKPEKL EF
|
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