Gene Adeg_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0208 
Symbol 
ID8490173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand+ 
Start bp205672 
End bp206706 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID646358247 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_003238229 
Protein GI260892132 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.203625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCCGCG TGGCGGTAGC CCTTTCCGGC GGCGTGGACA GCGCTACGGC CGCCTTCCTT 
CTCCTGCAGG CCGGCTACGA AGTCTTCGGG GTGACCATGC TGGTGACCGG GGAGGAGGGA 
GAAAAGGCGG CAGAGGTGGC GGCAAAGCTC AAGATACCCC ATTTCGTTTT TGACCTGCGG 
CAGGAGTTTG CCCAGGAAGT TATAAAACCC TTCGTCGAGG CCTACCTTGC TGGCCTTACC 
CCCAACCCCT GCGTCTGGTG TAACCGCAAA CTCAAGTTTG GTCTCCTGCT GGAGAAGGCA 
CTGAAACTCG GCGCGGACTT TTTGGCCACC GGCCACTACG CCCGCGTGTG GTTTGATCCT 
GCCCGCGAGC GCTACCTCCT GGCCAGAGGG AAGGACAGGC GCAAGGATCA GAGTTACTTC 
CTTTACTCCC TCAACCAGCA GCAGCTGGCC CGCGTGCTTT TCCCCTTGGG GGGGCGCACT 
AAGGCGGAAA ATCTGCTTTT GGTAAAGAAG CTGGGCCTTC CCTTGCGGGA AGAAAGCCAG 
GACGTTTGTT TCCTTAAAGG CGGCGATTAC CGGGAACTCA TAAAGGCTAT GGCCCAAGAA 
AAGGTAAAGC CCGGCCCCAT CTTGGACCCA CAGGGGAAAA AGATAGGCAC CCACCGGGGC 
TTGGCCTTTT ATACCATAGG GCAGAGGCGG GGGCTGGGGC ACGCTTGGGG AAAGCCCTAC 
TACGTCCTGG CCCTTGACCC CCGCCGCAAC GCCCTCATCG TGGGACCGGA AGAAATGCTT 
TACCGCCCTT CCTGCCGGGT CGAAGGGATT AATTTCATCC TTTTCGAGCG CCCTCCTGGT 
CCTTTCACGG CTGCTGTGCA GGTGAGGTAC ACTTCCCCCG CCGTCCCAGC CACCCTTTTT 
CCCGAAGGGG AAGCAGTGCG GGTGGAGTTT GCCTCTCCCC AGCGCGCCGT GACCCCGGGG 
CAGGCGGCGG TCTTTTACCA GGAGGACCTA GTAGTAGGTG GCGGTACTAT TGCTCCTTAC 
GGAAGCGACG GGTGA
 
Protein sequence
MTRVAVALSG GVDSATAAFL LLQAGYEVFG VTMLVTGEEG EKAAEVAAKL KIPHFVFDLR 
QEFAQEVIKP FVEAYLAGLT PNPCVWCNRK LKFGLLLEKA LKLGADFLAT GHYARVWFDP 
ARERYLLARG KDRRKDQSYF LYSLNQQQLA RVLFPLGGRT KAENLLLVKK LGLPLREESQ 
DVCFLKGGDY RELIKAMAQE KVKPGPILDP QGKKIGTHRG LAFYTIGQRR GLGHAWGKPY 
YVLALDPRRN ALIVGPEEML YRPSCRVEGI NFILFERPPG PFTAAVQVRY TSPAVPATLF 
PEGEAVRVEF ASPQRAVTPG QAAVFYQEDL VVGGGTIAPY GSDG