| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0197 |
|---|
| Symbol | |
|---|
| ID | 8490161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 192583 |
|---|
| End bp | 193692 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646358236 |
|---|
| Product | HtrA2 peptidase |
|---|
| Protein accession | YP_003238219 |
|---|
| Protein GI | 260892122 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGC GGCGCTGGAT AGCGCCCGTT GCGCTTTTGG CCTTTGTAGC CGGTATATTT
TTTGCTGCCG GCTGCTACTA CGCTTCTAGC TCTAAGACTC CTGCGCTGGC GGACACCCAG
GTGGCTCCGG GGGTGGGTCC GGACGCTATC GCCAACATCG TGGCTCAGGC CAGCCCGGCG
GTGGTGAAGA TCGACACCAT AGCTCCTAAG TTCGATCCTT TCTTTAATAA TCCATTTTTC
CGGCAGTTTT TTGGCGATAT TCCGCGGATG CAGGAATACC AGCAGGGATT GGGATCAGGT
TTCTTTATCT CTGACGACGG GTACATACTG ACTAACGAGC ACGTAATCGA CGGGGCTTCT
CAGATCACGG TCACAGTTTC AGGCTTCTCT CAGCCCTTTA AAGCGCGGGT GGTGGGCGCG
GATTATGATC TTGACCTGGC CATTTTAAAG ATCGATGTGC CCCAAAAGGT ACCTTTCCTA
AAGCTGGGCG ATAGCGAAAA AATGCGGGTG GGCGACTGGG TAATAGCCAT CGGCAACCCT
TACGGTCTTG ACCACACCGT CACGGTAGGG GTGCTCAGCG CCAAGGGCCG ACCGATCGAC
ATCGGCAACC GCCACTACAA GAACCTCCTG CAGACCGATG CTGCCATTAA CCCTGGCAAC
AGCGGTGGGC CGCTTTTGAA CCTCAAGGGC GAGGTCATAG GTATTAACAC GGCGGTTAAC
GCCCAGGCCC AGGGAATAGG CTTCGCCATT CCCTCGGACA CGGTGAAGAG CGTGCTCAAC
GAACTCATGA CCAAGGGTAA GATCATCCGC CCCTGGTTGG GTGTACAGGT AGGACCGGTG
GACGAGAACG TCGCCCAGTA CCTGGGCCTG CCCAAGGCGG AAGGGGCGCT GGTGCTGGGG
GTGGTTCCGG GTAGCCCGGC CGATAGGGCG GGCATTACAC GAGGGGATGT CATCCTGGAG
ATTAACGGGA AGAAGGTAAA GACTCCGGAC GACCTGGTGG CGGCGGTTAA GGAGCTGAAG
GTAGGATCTC AGGCCAACCT CTTGATTTGG CGGGGCGGCA AGCTCTTAAG GGTGCAGCTT
CAGGTGACGG AGAAGCCTGC AGGCTGGTAA
|
|---|
| Protein sequence | MTWRRWIAPV ALLAFVAGIF FAAGCYYASS SKTPALADTQ VAPGVGPDAI ANIVAQASPA
VVKIDTIAPK FDPFFNNPFF RQFFGDIPRM QEYQQGLGSG FFISDDGYIL TNEHVIDGAS
QITVTVSGFS QPFKARVVGA DYDLDLAILK IDVPQKVPFL KLGDSEKMRV GDWVIAIGNP
YGLDHTVTVG VLSAKGRPID IGNRHYKNLL QTDAAINPGN SGGPLLNLKG EVIGINTAVN
AQAQGIGFAI PSDTVKSVLN ELMTKGKIIR PWLGVQVGPV DENVAQYLGL PKAEGALVLG
VVPGSPADRA GITRGDVILE INGKKVKTPD DLVAAVKELK VGSQANLLIW RGGKLLRVQL
QVTEKPAGW
|
|---|
| |