Gene Adeg_0172 details

Gene Information

• Locus tag: Adeg_0172
• ID: 8490133
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013385
• Strand: +
• Start bp: 167259
• End bp: 169124
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646358208
• Product: sensory histidine kinase AtoS
• Protein accession: YP_003238194
• Protein GI: 260892097
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3852] Signal transduction histidine kinase, nitrogen specific
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.557198
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGT TCATGCGTTT CTGGAACCGG AAGTTAGGGT TTGGCAAACA GCTTTTTCTT 
TTCACCTTTG TGCTACTAGC TCTGCCAAGT TTTCTTACCT TTTACATGTT GCACGTGATG 
CAGCGGGCAG AGCAAGGGAT GATCGAAGGG GATAAAGCCA AACTGGAGCG GGCCATGGCC 
TTGCTGGATC ACCGTTTTCA CGGCACCTTT GAAGATATAT TGAAGGAACA TAATGTGCCG 
CCTGATGCCC GGACCCGGGA TAAGGTGCGG GTGCTCAACG AGGCGCTCAA ACCCATCATC 
GACTCGGTAG CGGCCGAGTA CCCGGGGGTG GAGTTCGGCT TTTACTCCAA GGATTTAGAC 
GTCATCCTCA ACGGGCGCAC TGAAACCTAC GGAGAAAACT TTTCTACCCG GCGCAAGGCG 
GATATTGAGC GCACCATCAC TACCCGCAGC CCGGTGGCTA CCGTGGTAGG GCCCAGCGGC 
ACAGGGCTTA TTGAGACCTA CCGGCCCCTC GTGCGCAATG GGGAGGTCAT CGGCGCGGTG 
GTAGCGCAGG AGAACGCCAA AGACGTTTAC CAGCGGCTGG CGCGGGTGCG GCGGGAGGCC 
TACCTCACCA TCGCCGCCGG AATTGTCATT GGAGTAGGAG GATTTTTCTT TCTGCTCAAC 
CGTTTTTTGG AAATTATCAG CCGGGTTAAG GAAGGGCTTT CCCACCTGGA GACCGATCTG 
AGCTACCGGC TCCCCCCGGC TTTCGGTGAG CTAGGGGAAA TTGCGGCGGC CATTAACCAT 
CTAGCTAACC GCTTGGCGGA AGTGAAGAGT TTCAACGAGC TTATCTTAGA TAACGTCGAG 
GCGGGCGTCA TAGCCCTGGA TACCGAGGGC AAGGTAGTGC TGGTAAATCC GGCGGCTGCC 
CGGACCCTGG GGGTTAACGC CAAGGAGATG GTGGGAAGGC CGGTGGCCGA GGTCTTTCCG 
CCAGGGCCGT TGCGGGAGGT TCTGGAGCGG GCCTGGCAGA AGGGGGAAAC AGTACGCGAA 
CTTTCTCTTA AGCACCCGGT GGGTGAAGGG GAAAGGGACC TCATCGTGGG GACCAACCTT 
CTCGCCGGCC CGCAGGGAAG CCCGGTGGGG GTGCTGCTCA CCTTCAGGGA CGTTACCGAG 
AGGCGCAGGC TGGAGGAGAG GGTGCAGCGC CAGGAGCGCC TGGCGGCGCT GGGCAAGTTC 
GTGGCTGGTG TAGCGCACGA GATCCGCAAT CCCCTCACCA CCATAAGTGG CTATATCCAG 
ATGTGGCAGC GTTACGGCAA GCCCACTCCT CACTCTCTTC CCTTGGTGGC CCAGGAAGTG 
CGGCGGCTTA ACGCCATCGT GGACAAGCTT TTGTTCTTTG CCCGCCCGGC GGAAATGAAG 
CTTCAGCCTT ACGATCTCAA CCAGCTGGTG GTTCAAGTGC TGCAGTTCAT AGGCCACGCC 
CAGGACAATA AGGTAAAGGT GGAGGTTTCG CTTTCACCGG AGCTTCCTAC GGTGCTCCTC 
GATCCCGAGC AAATGCGCCA GGTGCTCATG AACATAATCT ACAATTCTTA TCAGGCCATG 
CCTAACGGCG GGCTTCTCAG CGTCTCCACC GAGCTGACGT CCGACGGCAA GTACGCGGTG 
GTGACGGTGG GCGATACCGG ATGCGGCATC CCGCCCGAGA ACTTGCCCCG CATCTTCGAT 
CCTTTCTTCA CCACTAAGGC GCGGGGTAGC GGTCTGGGCC TGGCTCTGGC GCACGAAATA 
GTCACCGCCC ATGGGGGGCA TATCGAGGTG GAGAGCAAGG TAGGGGTGGG CACCACCATG 
CGCGTCTACC TGCCCGTGGG AGAAAAGGAG GTGCGAGTAG ATGGCCCGGG TGCTGGTGGT 
AGATGA 

 

Protein sequence

MKLFMRFWNR KLGFGKQLFL FTFVLLALPS FLTFYMLHVM QRAEQGMIEG DKAKLERAMA 
LLDHRFHGTF EDILKEHNVP PDARTRDKVR VLNEALKPII DSVAAEYPGV EFGFYSKDLD 
VILNGRTETY GENFSTRRKA DIERTITTRS PVATVVGPSG TGLIETYRPL VRNGEVIGAV 
VAQENAKDVY QRLARVRREA YLTIAAGIVI GVGGFFFLLN RFLEIISRVK EGLSHLETDL 
SYRLPPAFGE LGEIAAAINH LANRLAEVKS FNELILDNVE AGVIALDTEG KVVLVNPAAA 
RTLGVNAKEM VGRPVAEVFP PGPLREVLER AWQKGETVRE LSLKHPVGEG ERDLIVGTNL 
LAGPQGSPVG VLLTFRDVTE RRRLEERVQR QERLAALGKF VAGVAHEIRN PLTTISGYIQ 
MWQRYGKPTP HSLPLVAQEV RRLNAIVDKL LFFARPAEMK LQPYDLNQLV VQVLQFIGHA 
QDNKVKVEVS LSPELPTVLL DPEQMRQVLM NIIYNSYQAM PNGGLLSVST ELTSDGKYAV 
VTVGDTGCGI PPENLPRIFD PFFTTKARGS GLGLALAHEI VTAHGGHIEV ESKVGVGTTM 
RVYLPVGEKE VRVDGPGAGG R