Gene Adeg_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0172 
Symbol 
ID8490133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp167259 
End bp169124 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content59% 
IMG OID646358208 
Productsensory histidine kinase AtoS 
Protein accessionYP_003238194 
Protein GI260892097 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.557198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT TCATGCGTTT CTGGAACCGG AAGTTAGGGT TTGGCAAACA GCTTTTTCTT 
TTCACCTTTG TGCTACTAGC TCTGCCAAGT TTTCTTACCT TTTACATGTT GCACGTGATG
CAGCGGGCAG AGCAAGGGAT GATCGAAGGG GATAAAGCCA AACTGGAGCG GGCCATGGCC
TTGCTGGATC ACCGTTTTCA CGGCACCTTT GAAGATATAT TGAAGGAACA TAATGTGCCG
CCTGATGCCC GGACCCGGGA TAAGGTGCGG GTGCTCAACG AGGCGCTCAA ACCCATCATC
GACTCGGTAG CGGCCGAGTA CCCGGGGGTG GAGTTCGGCT TTTACTCCAA GGATTTAGAC
GTCATCCTCA ACGGGCGCAC TGAAACCTAC GGAGAAAACT TTTCTACCCG GCGCAAGGCG
GATATTGAGC GCACCATCAC TACCCGCAGC CCGGTGGCTA CCGTGGTAGG GCCCAGCGGC
ACAGGGCTTA TTGAGACCTA CCGGCCCCTC GTGCGCAATG GGGAGGTCAT CGGCGCGGTG
GTAGCGCAGG AGAACGCCAA AGACGTTTAC CAGCGGCTGG CGCGGGTGCG GCGGGAGGCC
TACCTCACCA TCGCCGCCGG AATTGTCATT GGAGTAGGAG GATTTTTCTT TCTGCTCAAC
CGTTTTTTGG AAATTATCAG CCGGGTTAAG GAAGGGCTTT CCCACCTGGA GACCGATCTG
AGCTACCGGC TCCCCCCGGC TTTCGGTGAG CTAGGGGAAA TTGCGGCGGC CATTAACCAT
CTAGCTAACC GCTTGGCGGA AGTGAAGAGT TTCAACGAGC TTATCTTAGA TAACGTCGAG
GCGGGCGTCA TAGCCCTGGA TACCGAGGGC AAGGTAGTGC TGGTAAATCC GGCGGCTGCC
CGGACCCTGG GGGTTAACGC CAAGGAGATG GTGGGAAGGC CGGTGGCCGA GGTCTTTCCG
CCAGGGCCGT TGCGGGAGGT TCTGGAGCGG GCCTGGCAGA AGGGGGAAAC AGTACGCGAA
CTTTCTCTTA AGCACCCGGT GGGTGAAGGG GAAAGGGACC TCATCGTGGG GACCAACCTT
CTCGCCGGCC CGCAGGGAAG CCCGGTGGGG GTGCTGCTCA CCTTCAGGGA CGTTACCGAG
AGGCGCAGGC TGGAGGAGAG GGTGCAGCGC CAGGAGCGCC TGGCGGCGCT GGGCAAGTTC
GTGGCTGGTG TAGCGCACGA GATCCGCAAT CCCCTCACCA CCATAAGTGG CTATATCCAG
ATGTGGCAGC GTTACGGCAA GCCCACTCCT CACTCTCTTC CCTTGGTGGC CCAGGAAGTG
CGGCGGCTTA ACGCCATCGT GGACAAGCTT TTGTTCTTTG CCCGCCCGGC GGAAATGAAG
CTTCAGCCTT ACGATCTCAA CCAGCTGGTG GTTCAAGTGC TGCAGTTCAT AGGCCACGCC
CAGGACAATA AGGTAAAGGT GGAGGTTTCG CTTTCACCGG AGCTTCCTAC GGTGCTCCTC
GATCCCGAGC AAATGCGCCA GGTGCTCATG AACATAATCT ACAATTCTTA TCAGGCCATG
CCTAACGGCG GGCTTCTCAG CGTCTCCACC GAGCTGACGT CCGACGGCAA GTACGCGGTG
GTGACGGTGG GCGATACCGG ATGCGGCATC CCGCCCGAGA ACTTGCCCCG CATCTTCGAT
CCTTTCTTCA CCACTAAGGC GCGGGGTAGC GGTCTGGGCC TGGCTCTGGC GCACGAAATA
GTCACCGCCC ATGGGGGGCA TATCGAGGTG GAGAGCAAGG TAGGGGTGGG CACCACCATG
CGCGTCTACC TGCCCGTGGG AGAAAAGGAG GTGCGAGTAG ATGGCCCGGG TGCTGGTGGT
AGATGA
 
Protein sequence
MKLFMRFWNR KLGFGKQLFL FTFVLLALPS FLTFYMLHVM QRAEQGMIEG DKAKLERAMA 
LLDHRFHGTF EDILKEHNVP PDARTRDKVR VLNEALKPII DSVAAEYPGV EFGFYSKDLD
VILNGRTETY GENFSTRRKA DIERTITTRS PVATVVGPSG TGLIETYRPL VRNGEVIGAV
VAQENAKDVY QRLARVRREA YLTIAAGIVI GVGGFFFLLN RFLEIISRVK EGLSHLETDL
SYRLPPAFGE LGEIAAAINH LANRLAEVKS FNELILDNVE AGVIALDTEG KVVLVNPAAA
RTLGVNAKEM VGRPVAEVFP PGPLREVLER AWQKGETVRE LSLKHPVGEG ERDLIVGTNL
LAGPQGSPVG VLLTFRDVTE RRRLEERVQR QERLAALGKF VAGVAHEIRN PLTTISGYIQ
MWQRYGKPTP HSLPLVAQEV RRLNAIVDKL LFFARPAEMK LQPYDLNQLV VQVLQFIGHA
QDNKVKVEVS LSPELPTVLL DPEQMRQVLM NIIYNSYQAM PNGGLLSVST ELTSDGKYAV
VTVGDTGCGI PPENLPRIFD PFFTTKARGS GLGLALAHEI VTAHGGHIEV ESKVGVGTTM
RVYLPVGEKE VRVDGPGAGG R