| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0144 |
|---|
| Symbol | |
|---|
| ID | 8490105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 136410 |
|---|
| End bp | 137444 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646358180 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_003238166 |
|---|
| Protein GI | 260892069 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGGA TGATGGATGC TAACCTTAAC CGGTTGCGTG AAGGGCTGCG AGTGCTGGAG
GACTTGGCCC GCTTTACCTT CCAGGAGCGC GCTTTGGCCG AAGAGGCCCG GGCCTTCCGG
CACCAGGTAG CTTGGAGCCG GGAGCCGGAG CAGGCCGAGT GCTTGGTCCA CCGGGACGTG
GCGGGCGATT GGGGGAAGGA TTACCGCTCT CTTCCTTACC CCTCCTTGAA GGAACTCGTT
CTGGCCAACT CCCGGCGCGT GCAGGAAGCG GCCCGGGTGT TGGAGGAACT CGCGCGGCTC
ACCCTCCCGG AAAGGGAGGA GTTATTTCGC AAAGTGCGCT TCTGGGCCTA TGCGGCGGAG
AAAAAGTTAT ATTCTTTGGC TACAGGAGAA GAACGCCGGC AGCGCTGCTG GCGCTGGCGG
CTTTACGTCA TAGTGGGTTC GGAGCACACG GGCGGGCGCG AGGTTCCGGC GGTGGTGCGG
GCGGCCATAG CCGGAGGAGC GGAGGTTATC CAGCTCCGGG AGAAAAAACT ATCCACCCGG
GCGCTTTACT CCTTGGCCCG CCAGCTCCGG GAGATAACCG GGGAGGCAGG GGTAGACCTC
ATCATCAACG ATCGGGTGGA CGTGGCCCTG GCGGTAGGGG CAGATGGGGT GCACCTCGGG
TCAGAGGATC TTCCCCTGCC TGAGGCCCGC CGGGTCATCG GGGACAAGCT CATTCTAGGG
GCTACGGCCC ACTCTTTGGA AGAAGCCCTA GAAGCTCAGG CGGCGGGAGC CGACTACCTG
GGAGTGGGGC CGGTCTTTCC TACCGCTACC AAGCCGGAAC TCAAACCTGG GGGGTTAAAA
CTTCTTCGGG AAGTAGCTTC CCAGGTATCC TTACCGGTGG TGGCCATAGG GGGTATCACG
GCGGAGAACG TGCGGGAAGT CTTAGCCCAG CCTGGGGTAA AGTGCGTGGC GGTGATTCGC
GCAGTAGCAA CAGCTCCTGA TGTTAAAGAG GCGGCGGCGC GGCTGAAACA AGCGATGGAG
GGGATGGGAT CTTGA
|
|---|
| Protein sequence | MWRMMDANLN RLREGLRVLE DLARFTFQER ALAEEARAFR HQVAWSREPE QAECLVHRDV
AGDWGKDYRS LPYPSLKELV LANSRRVQEA ARVLEELARL TLPEREELFR KVRFWAYAAE
KKLYSLATGE ERRQRCWRWR LYVIVGSEHT GGREVPAVVR AAIAGGAEVI QLREKKLSTR
ALYSLARQLR EITGEAGVDL IINDRVDVAL AVGADGVHLG SEDLPLPEAR RVIGDKLILG
ATAHSLEEAL EAQAAGADYL GVGPVFPTAT KPELKPGGLK LLREVASQVS LPVVAIGGIT
AENVREVLAQ PGVKCVAVIR AVATAPDVKE AAARLKQAME GMGS
|
|---|
| |