| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0046 |
|---|
| Symbol | |
|---|
| ID | 8490006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 40558 |
|---|
| End bp | 41961 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646358085 |
|---|
| Product | protein of unknown function UPF0236 |
|---|
| Protein accession | YP_003238072 |
|---|
| Protein GI | 260891975 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00191865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGATTA TAAAACAGAT TTGGGAGAAG TTCCAGAGGG TAGCGGAGCT AATGTTTGAG
GTATTAGAGA ACGGGATTGA TTTTATAAGC TTTCAGGAGA GGCTCCGGCG GGAACTCGAC
AGCTTAGGGC AAGAGATCCT GAGGGAAGTT CTGGAGGCAA AAGACGCTTA TTTACGGGAG
CACCGGGAAA AGCGGCCTGG CTGGCAAGTA GAGCGGAGGA ATGATCCCAA GGAAGTGCTC
ACCCTTTTCG GTCTGGTCAG CTACAAGCGG ACCTATTACC GGCACAAAGA GACTGGGGAG
CGGGCATACT TAATAGACCG TTTGGTGGGT TACGGGCCGC ATACGCGGGT TGACCCTCTG
GTCAAGGCAC AAGTTTTAGA AGAAGCAGTA GAGCTTTCTT ACCGGAAAAG TGGGGAAAGG
GCAGGAAAAG GCAACCCGGA GGTTGTGCTG AGTGGTGAGG CTGTGAAAAA GGTAGTTCAC
AACTTCACCC CTGCAGAACT GCCCGAACCA CCCAAAGAGA AGCGCCGGGT GAAGGTCCTT
TACGTAGAAG CGGACGAAGA CCACGTAGCT GGCCAGGACA AGAAGAGCCA CCTACCTCGT
CTTGTTTACA TACACGAAGG GAAAGAAGAG GTGGGGAAAG GGCGGTATAA GCTTAAGCGG
CCTTACTACC TGGGAGGGCT ATATCCGGAC ACGGATGAAC TGTGGCTGGA CGTTCTAACC
TACATTGAGG AGCATTATGA GCTACACGAT ATTGAGCGGA TCTATCTTTG TGGAGACGGG
GACAGGTGGA TAAAGAGGGG TCTGGAGTTT TTACCGAAGA GCGTATTTGT TCTGGACCTT
TTCCACCTGG ATAAATACCT CGTGGCCGCT TTAGGAAAGG ACAAAGAGGC ATATGGAGAG
ATTTGGGCAG CCTTGAGGCG TGGTGATCGG GTGGGGGTAG AGAAGGTACT GAAGGGAGCG
GCGAGGCAGG CGGAGACACC TGGCCGGAGG AAGGCGGTGC GTGATTGTCG GCGCTACATA
AATCAGAACT GGGAGGGGAT AACGGCATAC CGGCTTTACC CGGAGGCGCA GTTAGGGGTG
AGCGCGGAGG CTCACGTAAG CCACCTGTAC TCGGCGCGGT TGTCGTCGCG GCCGATGGCC
TGGAGTGCTT GTGGGGTAGA CCGGATGGCC CGGTTGCGGG TGGCGAAGGC GAATGGTGTT
TCCTTGCGGG AACAATATGT GGCCCGATGG AGGGAGGGCT TAAAGGCTTT AGAGATCGAT
AAGGCAGCCA TTGAGGAAGA GAGGCAGAGG CTAAGGAAAG TATCGGGTGA GGTGTTCGAG
AATATTCCCG CTTTGCGGGG TCCGGTAACG TCATTAACCA GAGCCCTCAA AGCTTTGAGC
CGGAACATCG GTCTTCTCTG GTAG
|
|---|
| Protein sequence | MQIIKQIWEK FQRVAELMFE VLENGIDFIS FQERLRRELD SLGQEILREV LEAKDAYLRE
HREKRPGWQV ERRNDPKEVL TLFGLVSYKR TYYRHKETGE RAYLIDRLVG YGPHTRVDPL
VKAQVLEEAV ELSYRKSGER AGKGNPEVVL SGEAVKKVVH NFTPAELPEP PKEKRRVKVL
YVEADEDHVA GQDKKSHLPR LVYIHEGKEE VGKGRYKLKR PYYLGGLYPD TDELWLDVLT
YIEEHYELHD IERIYLCGDG DRWIKRGLEF LPKSVFVLDL FHLDKYLVAA LGKDKEAYGE
IWAALRRGDR VGVEKVLKGA ARQAETPGRR KAVRDCRRYI NQNWEGITAY RLYPEAQLGV
SAEAHVSHLY SARLSSRPMA WSACGVDRMA RLRVAKANGV SLREQYVARW REGLKALEID
KAAIEEERQR LRKVSGEVFE NIPALRGPVT SLTRALKALS RNIGLLW
|
|---|
| |