| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5400 |
|---|
| Symbol | |
|---|
| ID | 8451033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 6042274 |
|---|
| End bp | 6045927 |
|---|
| Gene Length | 3654 bp |
|---|
| Protein Length | 1217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645044430 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_003204652 |
|---|
| Protein GI | 258655496 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCC CCGAGGCCCC CGGCCGCGAC GAGCTGGTCC GGGCGTCCGA TCACCCGTCG
GACCAGCACC CCGATCAGCG GACCGATCGG TACGACGGTC CGGCCGAGAC CGGCCGCCCG
CACGACGACG TCGCCGGGAT GAAGACCGCC CGGACCGCCG GCGTGGTCCG GGCCGGTGCG
GTGATGGCGT TGGCCACCCT GGTCAGCCGG GCGACCGGTT TCCTGGCCAA GGTGGTGATC
CTGGCCTTCC TGGGCTTCGG CCTGGTCAAC GACGCCTACA CGATCGCCAA CACCCTGCCC
AACATCATCT TCGAGCTGCT GATCGGCGGC GTGCTGACCT CGGTGGCCAT CCCGCTGCTG
TCCCGGGCCC GGGCCGATCG GGACGGCGGC GAGGGTTACA CGCAGCGGTT GATGACCATG
GCGATCGTCG GACTGATCGG CGCCACCGGT CTGTCCATGG CCGCCGCACC CCTGCTGACC
AGGCTGTATC TGTCCGGCAG CGAGTTCGTC GACCACGATC TGGCCAACGG GCTGGCCCTG
CTGCTGCTGC CGCAGATCTT CTTCTACGGG ATCGCCGCGC TGTTCGGCGC GATCCTGAAC
ACCAAGGAGA AGTTCGGCGT GCCGGCCTGG GCGCCGGTGG CCAACAACCT GGTCGTCATC
GGTGTCGGCA TCGCCCTGCT GATGACGACG AGCGACCCGC AGAACGTCGC CGACGTCAAC
GGCGCGCTGA CCGGCCTGAC CCGCCAGCAG TTCCTGATCC TGGGGCTGGG CACCACCGCC
GGCATCGTGC TGCAGGCCGT GGTGATGATC CCGTCGCTGC TGCGCGGCGG GTTCCGCTTC
CGCTGGCGGT GGGGCGGTGA CCGGCGGTTG CTGGAGGCCG GGCAGCTGAT GCTGTGGGCG
GTGGCCTACG TGCTCATCTC GCAGGCCGGC TACATCGTCA TCACTCGGGT CGCGTCGGCC
AACCTCCAGG GCGGTGTCTC GCTCTACGCG TTCGCCTCGC TGCTGTTCCA GCTGCCCTAC
GGCATCATCG GCGTCTCCAT CCTGACCGCG ATCATGCCGC GGATGAGCCG GCACGCCGCG
GCCGGGCAGT ACGAGCAGAT GAAGGACGAC GCCTCCCTGG GCAACCGGCT CTCCATCGTC
GCCCTGGTCC CGGTCGCCGC CGGCATGATC GTGCTGGCGA TCCCGCTGGC CATCGTGGCC
TCGCTGTACG GCAAGGTCTC GCTCGGCGAC GTCGCCATGC TGTCGGCCAC CCTGACCGCG
CTGGCCCTTG GCCTGGTGCC GTTCGCGGTC ACGCTGATGC AGATGCGGGT CTTCTACGCG
ATGAAGGATG CGCGGACCCC GGCCCTGATC AACCTGGTGA TGGTGGCGGT ACGGATCCCT
CTGCTGATCG CCTGCACCAC CTTCGCCCCG AGCCTGGTGG TTCCGGGGAT GGCGTTGGGC
ACCACGGTGT CCTACCTGGT CGGCGCGATC GTCGGCGAGA TCTGGTTGCG ACGCCGCTAC
GGGGCGATGG GCACCCGGCG GACCCTGATC ACCCTGGCCA AGATGGTGCT GGCCAGCGCG
GTCGGCGCGG TCGTCGCCTT CGGCGTGGGC CGGTTGGTCG TCACCGGTGC GGTGGACACC
CTCGGGGAGG CGCTGCTGCA GACCCTCGTC GGGGCGTCGG TCGGGCTGCT GGTGATCGCC
GGTCTGGCGC TGGCCCTTCG GGTCGAGGAA CTCGACCCGA TCCGGCGGCG GCTGCTGGGC
CGCTTGCCCG CCCGCTGGCG ACCGGGTCCG CCGGCCGCTC GAACGCAGAA ATCATCCGGA
TCGGTCAACC CCGATGCGCC TTCGCGCGTC CACGATGGCG GGCATGGCAC GCTCGTGGAG
AGTCACCGGT CCTCCGGTGA CCCGTCCGCG GACGTCACCC TCCCCACAGT GCCCGGACCG
TCGTCGATCA GCAGGGAGCA GGTGTCCGAA CCGGTGTCCG ACAACCGCAG CGGTGGCTCC
GCCGCCCAGC AGACCCCGAC CGCCGACGAT CCGGAGGCGA CCACCGAGGT CCATCTGGAC
GAGGTGAACC GTCCGGCGGA CGCCGACGAC GCGTCGTCGA CCAGCACCCT GGAGAGCACC
ACCAACGGCA GCCCGACCGC GGCCCCCCAC GGCAGCCCGG ACAGCGCCGC CACCCAGGCG
ATCGGCGCGG CCGAGTCGCC GCTGAACCCG GGCATGATGG TCGGCGGCCG GTACCGGCTG
GTCAGCCTGG TCGCCTCCGA CGGCAACGGG CACTGGTTCT GGCGGGCCAA GGACACGGTG
CTGCCGCGGG ACATGGCGGT CACGATCCTG CCCGACACCA CCGGCACCTC GGCCACCGTG
GCCCGCACGC TGCGGGCCGG CCGGCTGCAC CACGTCGGAC TGCCGCAGAC CCTGGACGTG
GGCACCGACC ACGGTCAGTC CTACGTGGTC GGGCAGTGGG TGGACGGGGC CACGCTGACC
GATCTGGTCT CCGGCGGGCC GCTGGAACCC GACGTCGCCA CCTCGGTGAC CGCGAAGCTG
TCCGAGGCCG TCGCCGAGGC GCACCGCAAC GGTGTGTCGC TGGGCGCCAT CCATCCCTCG
CTGGTCCGGG TCAACTTCGA CGGGCAGGTC CGCCTGTCCC ACGTCATCGC GCATGCCTCG
GCCACCCCGG ACCAGGACAT CCGGGCCATC GGCGGGCTGC TGTACCTGAC CCTGACCGGC
ACCTGGCCGC TCAACGACCC GACCGCCGGC ACCGGGGTGC CGCTGCCGGC CGCACCGACC
CGGCTGGGCC GCGAGATCCC GGCCGACGAG GTCGTGCCGA CCGTGCCCGA GGCCCTGTCG
GCGTTGGCTG GCCGGGCCCT GCATCCCGAA GAACCGGACG GCATCCACGC CGTCGGCGCC
ATTGCGGCCC TGCTGCGCAG CCCGGAGACG ACCGCCGGCG TCGCCGACGC CCCCGCGCCG
GCCGAGGCCC GGCCACTGTC CGCCGCCGAC CGCCGGCTGA TCCGCGAGCG GCGGGCCAAG
CTGAGCCTGG CCGGTGTCGT GCTCGCCGTC TTCGCCGTGC TGATCATGAT CGCGCTCGGT
GGGCTGGTGA ACCAGTTCAC CGCCTCGATC CAGAACAGCG CGCCGGAAGA ACTCCCGATG
ATCGACGCGG GGGCCACCAC CACGGCGCCG GCGGCCGAAG CCGCGCCGAC CACGACGGCG
GCGCCCTCGA CCAACGCGGC CGCGGCCGGA CCCGTGCCGA TCGTGGGCGG GGCGGTCTAC
GACCCCGAGG GCGACGGCAC CCCGGACTAC AAGGACTACG TGGACCGGGC GTTCGACGGC
AACGACGCCT CGTTCTGGCT GACCTGGGTC TACAAGCAGC AGCTGCCGAC CCTCAAGTCC
GGCGTCGGGC TGGTCGTCGA ACTCGACCAT GAGGTCACCC CGGCCCAGGT CACGGTCAAG
AGCGCGACCG AGGGCACGGG CATCGAGGTG CGCAGCGCCA CGTCGCTGAC GCCCGGACCG
CTGGCCGCCA ACCCCGTCCT GGGCACCGGG ACCGTCTCCG GCGGGGTCGC CACCATCGAC
CTGACCAATG CGCCCAAGTC CAAGTACCTG ATCGTCTACG TCACCAAGCT GGGCACGACG
CCGGACAAGC AGTTCCAGTC GAAGATCAAC GAGATCAACG TCACCGGGAG CTGA
|
|---|
| Protein sequence | MTTPEAPGRD ELVRASDHPS DQHPDQRTDR YDGPAETGRP HDDVAGMKTA RTAGVVRAGA
VMALATLVSR ATGFLAKVVI LAFLGFGLVN DAYTIANTLP NIIFELLIGG VLTSVAIPLL
SRARADRDGG EGYTQRLMTM AIVGLIGATG LSMAAAPLLT RLYLSGSEFV DHDLANGLAL
LLLPQIFFYG IAALFGAILN TKEKFGVPAW APVANNLVVI GVGIALLMTT SDPQNVADVN
GALTGLTRQQ FLILGLGTTA GIVLQAVVMI PSLLRGGFRF RWRWGGDRRL LEAGQLMLWA
VAYVLISQAG YIVITRVASA NLQGGVSLYA FASLLFQLPY GIIGVSILTA IMPRMSRHAA
AGQYEQMKDD ASLGNRLSIV ALVPVAAGMI VLAIPLAIVA SLYGKVSLGD VAMLSATLTA
LALGLVPFAV TLMQMRVFYA MKDARTPALI NLVMVAVRIP LLIACTTFAP SLVVPGMALG
TTVSYLVGAI VGEIWLRRRY GAMGTRRTLI TLAKMVLASA VGAVVAFGVG RLVVTGAVDT
LGEALLQTLV GASVGLLVIA GLALALRVEE LDPIRRRLLG RLPARWRPGP PAARTQKSSG
SVNPDAPSRV HDGGHGTLVE SHRSSGDPSA DVTLPTVPGP SSISREQVSE PVSDNRSGGS
AAQQTPTADD PEATTEVHLD EVNRPADADD ASSTSTLEST TNGSPTAAPH GSPDSAATQA
IGAAESPLNP GMMVGGRYRL VSLVASDGNG HWFWRAKDTV LPRDMAVTIL PDTTGTSATV
ARTLRAGRLH HVGLPQTLDV GTDHGQSYVV GQWVDGATLT DLVSGGPLEP DVATSVTAKL
SEAVAEAHRN GVSLGAIHPS LVRVNFDGQV RLSHVIAHAS ATPDQDIRAI GGLLYLTLTG
TWPLNDPTAG TGVPLPAAPT RLGREIPADE VVPTVPEALS ALAGRALHPE EPDGIHAVGA
IAALLRSPET TAGVADAPAP AEARPLSAAD RRLIRERRAK LSLAGVVLAV FAVLIMIALG
GLVNQFTASI QNSAPEELPM IDAGATTTAP AAEAAPTTTA APSTNAAAAG PVPIVGGAVY
DPEGDGTPDY KDYVDRAFDG NDASFWLTWV YKQQLPTLKS GVGLVVELDH EVTPAQVTVK
SATEGTGIEV RSATSLTPGP LAANPVLGTG TVSGGVATID LTNAPKSKYL IVYVTKLGTT
PDKQFQSKIN EINVTGS
|
|---|
| |