| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5385 |
|---|
| Symbol | |
|---|
| ID | 8451018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 6023870 |
|---|
| End bp | 6025171 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645044415 |
|---|
| Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
|---|
| Protein accession | YP_003204637 |
|---|
| Protein GI | 258655481 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 90 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGGAA ACAGGGTATG GCATCGGGCG TTGGGCCTGA TGGGGGCGAT CGTTGAGGAC
GTCGACGTCG ATGATCCGGA CTTGATCGTG GTGCGGGTCC GGCCAGTGAA GAGGTGGGCG
GGGCGGTGTG GCCGGTGTCG ACGCCGGTCG CCGTGGTACG ACCGGGGCGC CGGCCGTCGG
CAGTGGCGGA CGGTGGACGT GGGGTTGTCC CGGGCGGTGG TGGAGGCTGA GGCCCCTCGA
GTGTCGTGCC GTGAGCATGG TGTGGTCGTT GCGCATGTGC CCTGGGCCAG GCACGGCGCG
GGCCAAACCC TGGTGTTCGA CCGGACCGTG GCGTGGTTGG CCACTCAGAC CTCGAAGACA
GCCACGACCC AGCTGTTGCG GATCAGTTGG CGCACTGTCG GAGCGATCGA GTCTCGGTAC
TGGGCCGATC ATGAACGGTT GCAGGACCGG TTACGCGGGG TCCGCCGCCT CGGGATCGAT
GAGATCTCCT ACAAGCGTGG CCACCGGTTC CTCACCGTCG TGGTGGACCA CGACACCGGT
CACTTGTTGT GGGCGGCACC CGGTCGGGAC TCGGCAACGT TGCACCAGTT CTTCGATCTT
CTGGGGCCGG ATCGGTGCGC TCTGCTGACC CATGTCTCGG CCGACGGCGC CACCTACATC
AGCACGGTCG TCAAGCAGCG ATGCCCGAAC GCGGTCCGGT GTGCTGACCC GTTCCATGTT
GTTGGGTGGG CTACCGACGC CTTGGACAAG CTACGACGCA TCGTGATCAG CACGGCCCGT
CGGCAGGCCC GCCGGGCCGC CGTCGACCGC ATCGCGGGCG GCTCGAGCCC GGTCGTCACT
GCCGGGCAAG CCGGCGCTGA CCTGGTCAAG GGCATGGCCG GGGCCCGGTC GGCGTTGCTG
CGAAACTCGG AGGACCTCAC CGAGAATCAG CAGGTCAAAC TGGCCTGGAT CGCGCTGACC
GACCCCGACC TGCACCGCGC GTATCTGCTC AAGGAAGGCC TTCGACTGAT CTTCAAACTG
CCGGTCGAGC AGGCCGCCAC CGCCCTGGAG AACTGGATCA CCTGGGCGCG GACCGCCGGC
ATCGGCCTGT TCAGCAGCCT GGCGAAACGG ATCACTCGAC ATCGAGCCAG CATCCTGGCC
GCGATCGAGC ACCACATGTC CAACGGCCGC GTCGAGTCCG TCAACGCCAA GATCAGGCTG
ATCACCCGAG TCGCGTTCGG GTTCGCCTCT CCACACGCCC TCATAGCCCT GGCTATGCTC
CGGCTGGGCG GACACCGCCC AGCACTCCCA GGCCGCGGCT AA
|
|---|
| Protein sequence | MRGNRVWHRA LGLMGAIVED VDVDDPDLIV VRVRPVKRWA GRCGRCRRRS PWYDRGAGRR
QWRTVDVGLS RAVVEAEAPR VSCREHGVVV AHVPWARHGA GQTLVFDRTV AWLATQTSKT
ATTQLLRISW RTVGAIESRY WADHERLQDR LRGVRRLGID EISYKRGHRF LTVVVDHDTG
HLLWAAPGRD SATLHQFFDL LGPDRCALLT HVSADGATYI STVVKQRCPN AVRCADPFHV
VGWATDALDK LRRIVISTAR RQARRAAVDR IAGGSSPVVT AGQAGADLVK GMAGARSALL
RNSEDLTENQ QVKLAWIALT DPDLHRAYLL KEGLRLIFKL PVEQAATALE NWITWARTAG
IGLFSSLAKR ITRHRASILA AIEHHMSNGR VESVNAKIRL ITRVAFGFAS PHALIALAML
RLGGHRPALP GRG
|
|---|
| |