Gene Namu_5378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5378 
Symbol 
ID8451011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp6016362 
End bp6018410 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content72% 
IMG OID645044408 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_003204630 
Protein GI258655474 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA ACACCGCCCC CAAGCCGGTC AAGACCCTCT CCGAGGTGAT CATCCGGTTT 
GCCGGCGACT CCGGCGACGG GATGCAGCTC ACCGGCGACC GGTTCACCAC CGAGACGGCC
GCCTTCGGCA ACAGCCTGTC GACCCTGCCG GACTTCCCGG CGGAGATCCG GGCCCCCGCC
GGCACCCTGC CCGGGGTGTC CGCGTTCCAG CTGCACTTCG CCGACCACTC CGTCGTCACC
CCCGGCGACG CGCCGACCGT GCTGGTCGCG ATGAACCCGG CGGCGCTCAA GGCCAATCTG
GCCGACCTGC CCCGCGGCGG CACGATCATC GTGGACACCG ACGAGTTCAC CAAGCGCAAC
CTGGCCAAGG TCGGGTACAC CGTCAGCCCG GTCGAGGACG GCAGCCTGGG CGACTACCAA
GTGCACCCGG TCAAGCTGAC CTCGCTGACG GTGGATGCCG TGGCCAAGGT CGGGGTGAGC
CGCAAGGACG CCGAGCGGGC CAAGAACATG TTCGCGCTGG GGCTGCTGTC CTGGCTGTAC
CACCGCCCGC TGGAGGGCAC CCGCCGCTTC CTGGAGACCA AGTTCGCCGG CCGTCGCGAG
GTGCTGCGGG CCAACCTGGT CGCGCTGGAG GCCGGCTGGT CCTACGGCGA GACCACCGAG
GGCTTCGCGG TCAATTACGA GGTCAAGCCG GCCAGCCTGC CTCCTGGCCG CTACCGGACC
ATCCGGGGCA ACCAGGCCCT GGCCTACGGG CTGGTCGCGG CGGCCGAGCG GTCGAACCTG
CCGCTGTTCC TGGGCTCGTA CCCGATCACC CCGGCCTCCG ACATCCTGCA CGAGCTGTCC
GCGCTCAAGC ACTTCGGCGT GCGCACCTTC CAGGCCGAGG ACGAGATCGC GGGCGTGGCC
GCCGCGCTGG GCGCCTCCTA CGGCGGCAGC CTGGGCGTCA CCACCACCTC GGGCCCGGGC
ATCGCGCTCA AGGCCGAGAC CATCGGCCTG GCCGTGGCCC TGGAGCTGCC CCTGGTCGTG
GTCGACGTGC AGCGCGGTGG ACCGTCCACC GGGTTGCCGA CCAAGACCGA GCAGGCCGAC
CTGCTGCAGG TGCTGTTCGG CCGCAACGGT GAGGCGCCGG TGCCGGTGGT CGCCGCCCAG
ACCGCCTCCG ACTGCTTCGA CGCCGCGCTG GAGGCGGCGC GGATCGCCCT GACCTACCGC
ACCCCGGTTT TCCTGCTCTC CGACGGGTAC CTGGCCAACG GCTCCGAGCC CTGGCTGATC
CCGGACGTGG CCTCGCTGCC CGATCTGCGG GTCGAGTTCG CCACCGAGCC CAATGCCGGG
ACCGAGGACC GCCCGCTGTT CCTGCCTTAC CTCCGGGATC CGGACACGCT GGCCCGGCCC
TGGGCCATCC CCGGCACCCC CGGCCTGGAG CATCGGATCG GCGGCATCGA GAAGAAGGAC
GGCACCGGCG AGATCTCCTA CGACCCGGCC AACCACGACC ACATGGTGCG CACCCGGGCG
GCCAAGGTCG CCGGGATCCA GGTGCCGCCG CTGGAGGTGG ACGATCCGGA CGGCCAGGCC
GACCTGCTGG TGCTGGGGTG GGGCTCGACC TACGGCCCGA TCACCGGTGC GGTCCGGGTC
CTGCGGGCCC AGGGCGTCTC GGTGGCCCGG GCGCATCTGC GGCACCTGAA CCCGATGCCG
GCCAACTTGG ACGAGGTGCT GCGCCGCTAC CGCCGGGTCG TCGTGCCGGA GATGAACCTG
GGCCAGCTGG CCCTGCTGAT CCGTGGGCTG TATCTGGTAG ACGCGATCGG CATCAATCAG
GTGCGAGGTC TGCCGTTCCG GGTCGACGAC CTGGTCGGCG CCATCCGCTC GGCCCTGGAC
GGCACCATCA CCCGCACCGC GGTCGGCAGC GCCGGCCGGT ACGGCGCGGG CCCGAGCATC
CCGTCGATCA CCGTCGGCGA CGATCCGGAG CTGGCGGACA CCCCACCCGA TCGGGAACCG
GACCCCGTGC CGGACCAGGA GCCGGTGCCC GCCGGTTCCG GCCCGGCCAC GAACGGAGGC
ACGCGATGA
 
Protein sequence
MTNNTAPKPV KTLSEVIIRF AGDSGDGMQL TGDRFTTETA AFGNSLSTLP DFPAEIRAPA 
GTLPGVSAFQ LHFADHSVVT PGDAPTVLVA MNPAALKANL ADLPRGGTII VDTDEFTKRN
LAKVGYTVSP VEDGSLGDYQ VHPVKLTSLT VDAVAKVGVS RKDAERAKNM FALGLLSWLY
HRPLEGTRRF LETKFAGRRE VLRANLVALE AGWSYGETTE GFAVNYEVKP ASLPPGRYRT
IRGNQALAYG LVAAAERSNL PLFLGSYPIT PASDILHELS ALKHFGVRTF QAEDEIAGVA
AALGASYGGS LGVTTTSGPG IALKAETIGL AVALELPLVV VDVQRGGPST GLPTKTEQAD
LLQVLFGRNG EAPVPVVAAQ TASDCFDAAL EAARIALTYR TPVFLLSDGY LANGSEPWLI
PDVASLPDLR VEFATEPNAG TEDRPLFLPY LRDPDTLARP WAIPGTPGLE HRIGGIEKKD
GTGEISYDPA NHDHMVRTRA AKVAGIQVPP LEVDDPDGQA DLLVLGWGST YGPITGAVRV
LRAQGVSVAR AHLRHLNPMP ANLDEVLRRY RRVVVPEMNL GQLALLIRGL YLVDAIGINQ
VRGLPFRVDD LVGAIRSALD GTITRTAVGS AGRYGAGPSI PSITVGDDPE LADTPPDREP
DPVPDQEPVP AGSGPATNGG TR