Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5361 |
Symbol | |
ID | 8450994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 6000629 |
End bp | 6001633 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645044392 |
Product | Integrase catalytic region |
Protein accession | YP_003204614 |
Protein GI | 258655458 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 74 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGGGTG CTCGGTTGAC GGTGGAGGAG CGGATCGTGC TGGCCGATCT GTTGTTGGCC GGCGCGACGG CGGCGGCGAT CGGTCGCCAG CTTGGCCGGC ATCGGTCAAC GATCTGTCGC GAGATCAAGC GCAACAGCCT TCCCTCGCCG TACGGGTATC GGCCGCATGC GGCTCATTCG CAGTCCTGCG CGCGGGCTCC TCGACCCAAG CCGCGCAAGC TCGCGCCGGG CACCGCGCTA CGGGAAAGGG TGGTTTCGGA TCTGCGGCGG GGGTGGTCAC CGCAGCAGAT CGCGGGCCGG TTGGCTCGTG AGCATCCCGA TGAGCCAGGC TTACGTGTGT CCCACGAGAC GATCTATCAC GCGTGGTACG TCGGCGGCCG CGGCAGTTTG CGGCTGGCGC TGCAGGCCGA GGCTCGTATC GAACGGAGCA GGCGAAGTAC CCGCGACCGT CCGGAGTCGT TGCGAGGCAA AATCTCCGAT GCCGTCCCGA TTACGCAGCG CCCCGCCGAA GCCGATGACC GCAGGGTCCC TGGGCACTGG GAGGGTGACC TGGTGATCGG GGTCGGCAAA TCCTCGGCGA TCGCTACGGT CGTCGAACGG GCCTCCCGGT TCACCCTGAT CTGCGGCCTG CCCGGCGGAC GACGCACCGC AGCTGCGGTC AACGCATCGT TGACCTCGAA GATCACCGCG TTGCCCGCCG ATCTGCACCG CAGCCTCACC TGGGATCGGG GCAAGGAGAT GGCCCGGCAC GTGGACTTCA CCATCGCCAC GGGCATCAAG GTGTACTTCG CCGACCCTTA CAGCCCCTGG CAACGCGGAA CGAACGAGAA CACCAACCGG CTCATCCGCT ACTACTTCCC CCGCGGCGTC GCCGACTTCC GCACGATCAG TCAGGAAGAA CTCGATCACG TCGCGGACCT GCTCAACAGC CGCCCCCGCA AGGTCCTGGG GTACCGAACC CCAGCAGAAG TGCTGCAGGA GTTGACAGTT GCAACCACCA CTTGA
|
Protein sequence | MPGARLTVEE RIVLADLLLA GATAAAIGRQ LGRHRSTICR EIKRNSLPSP YGYRPHAAHS QSCARAPRPK PRKLAPGTAL RERVVSDLRR GWSPQQIAGR LAREHPDEPG LRVSHETIYH AWYVGGRGSL RLALQAEARI ERSRRSTRDR PESLRGKISD AVPITQRPAE ADDRRVPGHW EGDLVIGVGK SSAIATVVER ASRFTLICGL PGGRRTAAAV NASLTSKITA LPADLHRSLT WDRGKEMARH VDFTIATGIK VYFADPYSPW QRGTNENTNR LIRYYFPRGV ADFRTISQEE LDHVADLLNS RPRKVLGYRT PAEVLQELTV ATTT
|
| |