| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5349 |
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| Symbol | |
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| ID | 8450982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5986349 |
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| End bp | 5987173 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645044380 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_003204602 |
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| Protein GI | 258655446 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 73 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCACCA CCGACACGCT CAATCGCGAG ACCACGCTGT GCATCTCGCT CGCCGCGCGA
CCCAGCAACC TGGGTACGCG TTTTCACAAC TACCTCTACG ACGAGTTGGG GCTCGATTTC
GTCTACAAGG CGTTCGCCCC GACCGACATC GCCGCTGCGG TGGCCGGTAT CCGCGGGCTG
GGTATCCGCG GGGCCGGGGT GTCCATGCCG TACAAGGAGG TATGCATCCC CCTGCTGGAC
GAGCTGGACC CGTCGGCGGC GGTGATCGAC TCGGTGAACA CCATCGTCAA CACCGACGGC
CGGCTCGTCG GGTACAACAC CGACTACCTG GCCGTGGCCA CCGCGCTGGC CCGGCACGAG
ATCCCGGTGG GCACCGAGTT CTTGCTCCGC GGCAGCGGTG GGATGGCCAA GGCGGTGGCG
GCGGCGTTGC GTGATCACGG GCTGGGCACC GGCACCATCG TCGCCCGCAA CGCCCGGACC
GGGCCGGCGC TGGCCGCCCA GTACGGGTTC GACTGGGTCG CCGACGCCGG TGACCGGACG
GCGCCACTGC TGGTGAACGT GACGCCGGTG GGGATGGCCG GCGGTCCGCA GTCGGACGAG
ATGTCCTTCG ACCGGGCGGC AATTGCCCAG GCGCACACCG TGTTCGACGT GATCGCCTTC
CCGGCCCGGA CGCCCCTGAT CCGGGCCGCG GAGGAAGCGG GCAAGCCCAC CATCACCGGG
GCGGAGATCA TCGCCGCCCA GGCGGCCGAG CAGTTCGCCC TCTACACCGG GATCCGGCCG
GACGACGAGC AGATCCGGCG CGCGTCGGAG TTCTCCCGCG CCTGA
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| Protein sequence | MPTTDTLNRE TTLCISLAAR PSNLGTRFHN YLYDELGLDF VYKAFAPTDI AAAVAGIRGL
GIRGAGVSMP YKEVCIPLLD ELDPSAAVID SVNTIVNTDG RLVGYNTDYL AVATALARHE
IPVGTEFLLR GSGGMAKAVA AALRDHGLGT GTIVARNART GPALAAQYGF DWVADAGDRT
APLLVNVTPV GMAGGPQSDE MSFDRAAIAQ AHTVFDVIAF PARTPLIRAA EEAGKPTITG
AEIIAAQAAE QFALYTGIRP DDEQIRRASE FSRA
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