Gene Namu_5347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5347 
Symbol 
ID8450980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5983861 
End bp5984646 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID645044378 
ProductABC transporter related 
Protein accessionYP_003204600 
Protein GI258655444 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC CGAGCACCCC GATCCTCGAA CTTCGGGGGG TGAACAAGAG TTTCGGCGCC 
GTGCAGGTGT TGCACGGGGT CGATCTGAAG ATCTACCCGG GTCAGGTCAC CGCCCTGGTC
GGCGACAACG GCGCGGGCAA GTCCACTCTC GTCAAGTGCG TGGCCGGTAT CCACGGCATC
GACAGTGGCG ATTATCTTTT CGAGTCGAAC CAGGTCAGTG TGGCCAATCC ACGCGACGCC
GCGCACCTGG GCATCGAGAT CGTGTACCAG GATCTCGCGC TGTGCGACAA CCTGGACATC
GTCCAGAACA TGTTCCTGGG CCGCGAACCC AAGTCCGGCC TGGTGCTCGA CGAGGCCCAG
ATGGAGATCA AGGCCCGGGA CACCCTGGCC TCGCTGTCCG TGCGGACCGT GACCTCGGTC
CGCCAGCTGG TCGCCAGCCT CTCCGGTGGC CAGCGGCAGA CCGTGGCCAT CGCCAAGTCC
GTGCTGTGGA ACTCCAAGGT CGTGCTGCTC GACGAGCCCA CCGCCGCACT GGGTGTCGCG
CAGACCCGGC AGGTGCTGGA CCTGGTCCGG CGGCTGGCCG ACAACGGCCT GGGCGTCCTG
CTGATCAGCC ACAACATGAA CGACGTCAAG GAGGTCAGCG ACCGGATCAC CGCGCTGTAC
CTGGGCCGGG TCGCCGCCGA CGTGGCCGCC AAGGACGTGT CCACCGGCCA GATCGTCGAA
CTGATCACCA GTGGCCGGTC GGGTTCGATC GGCCTGTCCG CCGCGGTTGC GCAGGAGTCC
GCATGA
 
Protein sequence
MTDPSTPILE LRGVNKSFGA VQVLHGVDLK IYPGQVTALV GDNGAGKSTL VKCVAGIHGI 
DSGDYLFESN QVSVANPRDA AHLGIEIVYQ DLALCDNLDI VQNMFLGREP KSGLVLDEAQ
MEIKARDTLA SLSVRTVTSV RQLVASLSGG QRQTVAIAKS VLWNSKVVLL DEPTAALGVA
QTRQVLDLVR RLADNGLGVL LISHNMNDVK EVSDRITALY LGRVAADVAA KDVSTGQIVE
LITSGRSGSI GLSAAVAQES A