Gene Namu_5341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5341 
Symbol 
ID8450974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5975022 
End bp5976923 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content72% 
IMG OID645044372 
Product5-oxoprolinase (ATP-hydrolyzing) 
Protein accessionYP_003204594 
Protein GI258655438 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAAC CTGCTGCTGA CCAGGACGAA CCGGTGAGCG ATCCGATCCT GGTCGAGATC 
GTCGCCGGCA CCCTGGCCTC GGTCGAGTCC GAGGTGGAGA CCGCGATCGG GCGTACCGCG
CGCTCGCCGA TGATCCGCGA CGCCCACGAC TTCCGGGTCG GCATCCACGA CGTGCACATG
CGCAAGCTGA CCGGCCGGTC GTACTCGGCG CTCGTGCAAC CGGTCGTCCG GGACTACCCG
ATCGCCACCA TGGTGCCGGG CGACGTCTTC TTCCACAACG ACGTCTACCT GTCCGAGGGT
GGCATCGGGC ACCTGCCCGA CCTGTGCGTC ACCGTGCCCG TCTTCCATGA CGGGCAGGTC
GTCGCGTTCG TGCAGGCGTT CGGCCATCAC GACGACATCG GCGGCACCGT GCCCGGTTCC
ATGCCCTCGC ACGCCACCAG CGTGTTCGAG GAGGGCCTGA TGGTGCCGCC GATCAAGCTG
TGGGCGGCCG GCGTGCCCAA CGAGGCCGCG CTGAAGATCA TGACCCGCAA CTCCCGGATG
CCCGAGTCGC TCTCGGCCGA CCTGGACGCC GAGTGCAGCG CCTGCCTGAT GGGCGCGCGC
CGGATCGCCG ACCTGTTCGA CCGGTACGGG CGATCCGCGG TGGAGGCCGC GTTCGCGGCC
ATCCTGTCGG CGACCACCCG CGCGTACCGG ACCGAGCTGC TGAGCAAGAT CCCGGACGGG
CAGTACGTCT GGGAGGACTA CGCCGAGCAC GACGGCGTCG ACCCGCCCCG GCTGCACGCC
CAGCGCATTA CCCTGACCAA GCTCTCCGAC GGCGACGGGG TGAGCGGCGC CCGGCTGATC
CTGGACTTCA CCGGAACCTC GCCGCAGGCC CGCGGCCCGA TCAACCACTG CGCCGACTAC
GCCGACGGGG TGTTCCTGGC CAAGTGGCTG GCCCCGGTGC TGCGGAATCT GGCCGATTCG
CCGGAGCGGA TGGCCCAGCT GAACGCCAAC GAAGGGGTGG TGCCGCTGCT CGAGCTGCGG
TTCCCCCCCA AGGGCACCCT GCTCACGCCG ATCTTTCCGG CGCCGACCAA CGCGCGCACG
TTCGTCATCC TGCGGTTGCT CGGCGTGCTG ACCGGGGTGC TGGCCAAGGC GGTCGGCGGC
CGGATGCCGG CCGATCAGGA GACCATCCGC TACACCGGCG TCTACGGCAC CGACCTGGAC
GGACGGCCGT ACCTGATGCG CGAGGTGCTC GGCGGCGGGT CCGGCGGCCG GCCCTACGCC
GACGGCGAGG ACACCGTGCA CGTCGTCCCG GACTCGCGAA ACCTGCCGAC CGAGTTCTCC
GAGGCCCGCT TCCCGTTCGT CGTCGAACGC CTGGGCCTGG CCGTCGACTC CGGCGGGCCC
GGCCGGCACC GGGGCGGCCT GGGCTACGAC AAGCACATCC GGATGCTGGT GGACGCCCAC
TTCATGTCGA TCGCCGACCG ATCGATTTTG TCCTGCTGGG GCGTGGCCGG CGGCCGGGCC
GGCCGGCCGT TCGAGGTGGT CATCGACCCG GGCGGACCGC ACGAGCGCGC CGTCGATGCC
CTGGCCGACG CCGAGCCGGT GCGCGCCGGG GAGATCATCC GCATCCGCAC GACCGGTGGC
GGCGGGTGGG GCGACCCGCT GACCCGGCCG GTCGTCGAGG TGCTGCGGGA CGTGCAGTGG
CGCAAGGTCT CCGTCGACGG TGCGCGACGG GACTACGGCG TGGTGCTGAC CGGCTCACCC
GACGCCGGCG CCGACACCCT GGGCGTGGAC GGACCGGCCA CCGCTTCCCT GCGCGCGACG
CTGGTGGCCG ACCGCGCGGG GGAGGAACCG ATGTTCGACC GTGGTCCCGG GTACTCCCGC
CTGTCGGGTG GACGCTCCTG GGCCGAGGTG GACCACCGCT GA
 
Protein sequence
MGQPAADQDE PVSDPILVEI VAGTLASVES EVETAIGRTA RSPMIRDAHD FRVGIHDVHM 
RKLTGRSYSA LVQPVVRDYP IATMVPGDVF FHNDVYLSEG GIGHLPDLCV TVPVFHDGQV
VAFVQAFGHH DDIGGTVPGS MPSHATSVFE EGLMVPPIKL WAAGVPNEAA LKIMTRNSRM
PESLSADLDA ECSACLMGAR RIADLFDRYG RSAVEAAFAA ILSATTRAYR TELLSKIPDG
QYVWEDYAEH DGVDPPRLHA QRITLTKLSD GDGVSGARLI LDFTGTSPQA RGPINHCADY
ADGVFLAKWL APVLRNLADS PERMAQLNAN EGVVPLLELR FPPKGTLLTP IFPAPTNART
FVILRLLGVL TGVLAKAVGG RMPADQETIR YTGVYGTDLD GRPYLMREVL GGGSGGRPYA
DGEDTVHVVP DSRNLPTEFS EARFPFVVER LGLAVDSGGP GRHRGGLGYD KHIRMLVDAH
FMSIADRSIL SCWGVAGGRA GRPFEVVIDP GGPHERAVDA LADAEPVRAG EIIRIRTTGG
GGWGDPLTRP VVEVLRDVQW RKVSVDGARR DYGVVLTGSP DAGADTLGVD GPATASLRAT
LVADRAGEEP MFDRGPGYSR LSGGRSWAEV DHR