Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5330 |
Symbol | |
ID | 8450963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5962880 |
End bp | 5963821 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645044363 |
Product | putative transcriptional regulator |
Protein accession | YP_003204585 |
Protein GI | 258655429 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 93 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGA GGAACGGCTA CGAGGCCGCC CGACCACCGG AAGAAAGATC GAGGCTAGGC TGCCCGATCG TGGAATTCGG ACAGGACTCG GTGATCGCGA TTGCGGTTGC CCTGCCGGTG TGGCTGCTGG TCGCCTACCT GATCGGGCAG CTGGCCCGCT GGCTGCTCCG GGGGCGCGTG TCGCTGTCCA CTAGCAGCAC GACCGTCATC GCGGTGCTGG GCGTCTCCGG CGGGATGCTG ATCGGTGGCC TGATCGACTC CGCGTCGAAC CCGTGGAGCC TGCGGGTGGT GCTGCTGGCC GTCCTGGTCA CCACCGCGCT GCTGGCGATG TTCGCCGCGG TCGCCGCCCG CCTGCAGCCG CCGCGGCCGG CCGAACCCGT GCAGGAGCTG ATCCGGCGCG GGGAATCCGA CCGGCTCGAG TTCAAGTCCA GCGCCCGCTG GAACCTGCAC ACCAAGGCCC GCGACGAACG GATCGAACTG GTCATCGCCA AGGCGGTGTC CGGGTTCCTG AACTCCGACG GCGGGACCCT GCTGATCGGG GTGAACGACG CCGGCGACGT GATCGGCCTG GCCAACGACT TCACGGTGGT CAAGTCGCCC GACGCGGACC GGTTCGAGCT ATGGCTGCGG GACTACCTGG CCACCGCGCT CGGTCAGACC GCCGCCGGCC AGGTTGTCAT CGACTTCACT CCGGTCACCG TGGACGGCGC CGACACCTAC GTCTGCCGGG TGACCTGCCC GGCCTCACCC CGCCCGGTGT TCCTGCGGCC GGGCAAGGGC GGCGCCGTCT CCGAGCTGTG GGTGCGCATC GGCAACTCCA CCCGGCAGCT CAAGGTCGAC GAGGCGGTCG ACTACGTCAT GCACCGCTGG CCGCTGGGGG TCGGTCGAAC CCTGTCCGCG CAGCTGCGGG CCGCGGCCCG CGGGTCGGGA ACGGCCGCCT GA
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Protein sequence | MIMRNGYEAA RPPEERSRLG CPIVEFGQDS VIAIAVALPV WLLVAYLIGQ LARWLLRGRV SLSTSSTTVI AVLGVSGGML IGGLIDSASN PWSLRVVLLA VLVTTALLAM FAAVAARLQP PRPAEPVQEL IRRGESDRLE FKSSARWNLH TKARDERIEL VIAKAVSGFL NSDGGTLLIG VNDAGDVIGL ANDFTVVKSP DADRFELWLR DYLATALGQT AAGQVVIDFT PVTVDGADTY VCRVTCPASP RPVFLRPGKG GAVSELWVRI GNSTRQLKVD EAVDYVMHRW PLGVGRTLSA QLRAAARGSG TAA
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