Gene Namu_5330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5330 
Symbol 
ID8450963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5962880 
End bp5963821 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content70% 
IMG OID645044363 
Productputative transcriptional regulator 
Protein accessionYP_003204585 
Protein GI258655429 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones93 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGA GGAACGGCTA CGAGGCCGCC CGACCACCGG AAGAAAGATC GAGGCTAGGC 
TGCCCGATCG TGGAATTCGG ACAGGACTCG GTGATCGCGA TTGCGGTTGC CCTGCCGGTG
TGGCTGCTGG TCGCCTACCT GATCGGGCAG CTGGCCCGCT GGCTGCTCCG GGGGCGCGTG
TCGCTGTCCA CTAGCAGCAC GACCGTCATC GCGGTGCTGG GCGTCTCCGG CGGGATGCTG
ATCGGTGGCC TGATCGACTC CGCGTCGAAC CCGTGGAGCC TGCGGGTGGT GCTGCTGGCC
GTCCTGGTCA CCACCGCGCT GCTGGCGATG TTCGCCGCGG TCGCCGCCCG CCTGCAGCCG
CCGCGGCCGG CCGAACCCGT GCAGGAGCTG ATCCGGCGCG GGGAATCCGA CCGGCTCGAG
TTCAAGTCCA GCGCCCGCTG GAACCTGCAC ACCAAGGCCC GCGACGAACG GATCGAACTG
GTCATCGCCA AGGCGGTGTC CGGGTTCCTG AACTCCGACG GCGGGACCCT GCTGATCGGG
GTGAACGACG CCGGCGACGT GATCGGCCTG GCCAACGACT TCACGGTGGT CAAGTCGCCC
GACGCGGACC GGTTCGAGCT ATGGCTGCGG GACTACCTGG CCACCGCGCT CGGTCAGACC
GCCGCCGGCC AGGTTGTCAT CGACTTCACT CCGGTCACCG TGGACGGCGC CGACACCTAC
GTCTGCCGGG TGACCTGCCC GGCCTCACCC CGCCCGGTGT TCCTGCGGCC GGGCAAGGGC
GGCGCCGTCT CCGAGCTGTG GGTGCGCATC GGCAACTCCA CCCGGCAGCT CAAGGTCGAC
GAGGCGGTCG ACTACGTCAT GCACCGCTGG CCGCTGGGGG TCGGTCGAAC CCTGTCCGCG
CAGCTGCGGG CCGCGGCCCG CGGGTCGGGA ACGGCCGCCT GA
 
Protein sequence
MIMRNGYEAA RPPEERSRLG CPIVEFGQDS VIAIAVALPV WLLVAYLIGQ LARWLLRGRV 
SLSTSSTTVI AVLGVSGGML IGGLIDSASN PWSLRVVLLA VLVTTALLAM FAAVAARLQP
PRPAEPVQEL IRRGESDRLE FKSSARWNLH TKARDERIEL VIAKAVSGFL NSDGGTLLIG
VNDAGDVIGL ANDFTVVKSP DADRFELWLR DYLATALGQT AAGQVVIDFT PVTVDGADTY
VCRVTCPASP RPVFLRPGKG GAVSELWVRI GNSTRQLKVD EAVDYVMHRW PLGVGRTLSA
QLRAAARGSG TAA