Gene Namu_5320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5320 
Symbol 
ID8450953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5950083 
End bp5950667 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID645044353 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003204575 
Protein GI258655419 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CAACGGACAT GGGCGAGGTC GTCAGGGCGG CCGCGCAGGG CAGTCAGCAG 
GCGTGGGATG TGCTGGTGGA CCGGTACATG CCGTTGGTCA TCTCGGTCGC CCGAGGTTTT
CGACTCTCCA GCAAGGATGT CGAGGACATC AGTCAGACCG TGTGGCTGCG GCTGGTCGAG
CACATCGACT CGTTGCGCGA GCCGCGGGCG CTGCCCGGCT GGATCGTGAC GACGGCGCGG
CGCGAGGCCA TCCGCGTGCA GCGTTCGAAA CTACAGACCA ACCCGGTGGA CCCGGGTGCG
GGAGGACCGT TGGACAGGGA CGCGGACTCG GTTGGCATGG ACGACCGACT CCTGACCGCC
GAGCGGCACC GCGCCTTGCG CGGCGGCCTG CGCGAGCTGC CGGTGCTGCA CCGTCAGCTC
ATCGAACTGA TGGTCATCGA CCCCCCGCTG AGCTACCAGG AAATCAGTGC CCGGCTGGCC
ATCCCGGTCG GCAGCATCGG TCCGACCCGC AAGCGGGCGC TGGCCAAGCT ACGGGCGACC
GGACCGATCC AGTCCCTGCT CGGAGCGGAG AGTGAGCGGC GATGA
 
Protein sequence
MTETTDMGEV VRAAAQGSQQ AWDVLVDRYM PLVISVARGF RLSSKDVEDI SQTVWLRLVE 
HIDSLREPRA LPGWIVTTAR REAIRVQRSK LQTNPVDPGA GGPLDRDADS VGMDDRLLTA
ERHRALRGGL RELPVLHRQL IELMVIDPPL SYQEISARLA IPVGSIGPTR KRALAKLRAT
GPIQSLLGAE SERR