Gene Namu_5318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5318 
Symbol 
ID8450951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5947974 
End bp5949527 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content72% 
IMG OID645044351 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_003204573 
Protein GI258655417 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACC CGCACAGCGC CCCACCCCCA CGCGCCGCCG TCCCCGCGTC CCGGCACGGC 
GTGGATCCGG CCTTCACCGC CCTGCCGTTG GCCGCGCTCG CCGACGCCGC GCTCGGCGCG
GCGACCGCCG CCGGCGCCGG TTTTGCCGAC TTCCGGTTCG AGCGCCTGCT CACCTCGACC
CTGAGCATCC GGGACACCGC GGTGCAGAGC GCGACCGATG GGCAGAGGAC CGGCTTCGCC
GTGCGGGTGA TCGTCGACGG CGTTTGGGGA TTCGCCGCCT CCGTCGTGCC CACCCCGGAC
GCGGCCGCGG CCACCGCCCG CCGGGCCGTC CAGGTCGCCC GCGCCCTGGC CCGGGTCGTC
GACGAACGGG TGGAGCGGGC CGACGAGCCG GTGCACGCCG ATCAGGAATG GGTCAGCGCC
TACCACGTCG ACCCGTTCGC GGTGGCCGGC GCGGACAAGA TCGCCCTGCT GCTGGACCGC
TCCGAGCGGC TGCTGGCCGC CGACGGGGTG GCCCACACCG AGGTCGGCCT GTTCCAGGTC
AAGGAGAACA AGTACTACGC CGACACCGCC GGCACCCGGA CCACCCAGCA ACGGGTGCGG
CTGGAACCGA CGCTGGTCGC GACCGCCATC GACAGCGCCA CCGGCGCATT CGAGACGATG
TCCTCGCTCA CCCCGCCGGT CGGTCGGGGG TACGAGTACC TGACCGACGG CACCTGGGAC
TTCGACGGCG AGATCGCCGT CATGGGCGAG CAGCTGATGG AGAAGGTGAA GGCGCCCTCC
GTCGAACCCG GCCGCTACGA CCTGGTCATC GACCCGACGA ACCTGTGGCT GACCATCCAC
GAGTCGATCG GCCACGCCAC CGAGTACGAC CGGGCCATCG GCTACGAGGC GGCGTACGCG
GGCACCTCCT TCGCCACCCC GGACAAGCTC GGGTCGTTGG TCTACGGCTC GCCCGGGATG
CACGTCACCG GTGACCGGAC CGTCCCGCAC GGGTTGGCCA CCATCGGGTT CGACGACGAC
GGCGTGGCCG GGCAGTCCTG GGACCTGATC CGGGGCGGCC TGCTGGTCGG CTACCAGCTG
GACCGCACCT TCGCCCACCG GTTGGGGCTG CCCCGGTCCA ACGGCTGCGC GTTCGCCGAC
TCGTCCGGGC ACATCCCGAT CCAGCGGATG GCCAACGTGA GCCTGCAACC TGACCCGGCC
GGCGGGAGCA CCGCCGACCT GATCTCCGGG GTGGACGACG GCATCTACGT CGTCGGCAAC
AAGTCCTGGT CGATCGACAT GCAGCGCTAC AACTTCCAGT TCACCGGGCA GCGGTTCTAC
CGCATCCGCG GCGGCCGGCT GGCCGGACAG GTCCGGGACG TGGCCTACCA GGCGACGACC
ACCGACTTCT GGGGCTCGAT GGACGGGATC GGCGGGCCGT CCACCTACCT GCTCGGGGGC
GCGTTCAACT GCGGCAAGGG CCAACCGGGC CAGGTCGCGG CGGTCTCCCA CGGGTGCCCA
TCCGCCCGGT TCCGCGGGGT CAACATCCTC AACGCCACCC AGGAGGCCCA GTGA
 
Protein sequence
MSDPHSAPPP RAAVPASRHG VDPAFTALPL AALADAALGA ATAAGAGFAD FRFERLLTST 
LSIRDTAVQS ATDGQRTGFA VRVIVDGVWG FAASVVPTPD AAAATARRAV QVARALARVV
DERVERADEP VHADQEWVSA YHVDPFAVAG ADKIALLLDR SERLLAADGV AHTEVGLFQV
KENKYYADTA GTRTTQQRVR LEPTLVATAI DSATGAFETM SSLTPPVGRG YEYLTDGTWD
FDGEIAVMGE QLMEKVKAPS VEPGRYDLVI DPTNLWLTIH ESIGHATEYD RAIGYEAAYA
GTSFATPDKL GSLVYGSPGM HVTGDRTVPH GLATIGFDDD GVAGQSWDLI RGGLLVGYQL
DRTFAHRLGL PRSNGCAFAD SSGHIPIQRM ANVSLQPDPA GGSTADLISG VDDGIYVVGN
KSWSIDMQRY NFQFTGQRFY RIRGGRLAGQ VRDVAYQATT TDFWGSMDGI GGPSTYLLGG
AFNCGKGQPG QVAAVSHGCP SARFRGVNIL NATQEAQ