Gene Namu_5314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5314 
Symbol 
ID8450947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5942009 
End bp5943952 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content69% 
IMG OID645044347 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_003204569 
Protein GI258655413 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGG TGATCCGTCC GACCGACGAA GCAACTGGTG CCGCCGAGAT CCCGGCGACC 
TCGATCTCCG GGTCGTTCTC GGCCGGGCCC GGGGTGCCCG CCGGCATCAA GGTGGAGGGG
GCGCCGGCCG GAACCTCGCC CGCGCTGCTG TCCTGGGTCC TCGAGGTCGC CGAGCTGACC
CGGCCGGATC GGGTCGTCTT CACCGACGGG TCCGACCAGG AATGGGACCG GCTCATCGAG
CACATGCTCG GCACCGGCAC GATCACCAAG CTCGCGGCCA AGGAGAACTC CTACTGGGCC
GCGTCCGACC CGACGGACGT CGCCCGGGTC GAGGACCGCA CCTACATCTG CTCGGTCGAT
CCGGCCGACG CGGGGGCCAC CAACAACTGG ATGGACCCGA CCGCCATGAA GTCGATCATG
ACGGCCCTGT ACGAGGGCTG CATGACCGGC CGCACCATGT ACGTGATGCC CTTCTGTATG
GGCCCGTACG ATGCGCCGAA CCCCAAGCTG GGGGTGGAGA TCACCGACTC GGAGTACGTG
GTCGCGTCGA TGCGGATCAT GACGCGCATG GGGACCAAAG CCCTCGAATT GATTAACGCG
GGCAACCCGT GGGTCAAGGC GCTGCACTCG ATCGGCGCTC CGCTGGCCCC CGGTCAGCAG
GACGTGCCCT GGCCATGCAA CGACACCAAG TACATCGTGC AGTTCCCCGA GGAGCGGACC
ATCTGGTCGT TCGGCTCCGG CTACGGCGGC AACGCCCTGC TGGGTAAGAA GTGCTACTCG
CTGCGCATCG CCTCGGTGAT GGCCCGCGAC GAGGGCTGGC TGGCCGAGCA CATGCTGATC
CTGAAGATCA CCTCGCCCGC GGGCAAGGTC GACTACCTCG CTGCCGCGTT CCCCAGCGCC
TGTGGCAAGA CCAACCTGGC CATGCTCGAG CCGACCATCC CGGGCTGGAA GGTCGAGACC
CTCGGCGACG ACATCGCCTG GATGACCTTC GGTGAGGACG GCCGGCTGTA CGCGGTCAAC
CCCGAGTACG GCCTGTTCGG CGTCGCCCCC GGCACCGGCT GGAACACCAA CCCGAACGCG
ATGCGCACCA TCGCCCAGGG CAACTCCCTG TTCACCAACG TCGCCCTGAC CGACGACGGG
GACATCTGGT GGGAGGGCCT GACCGAGGAG CCCCCGGCCC ACCTGACGGA CTGGAAGGGT
CGCGACTGGA CCCCGTCCGG TTTAGATGAG CACGGCCGCC GACTCGATTC CGCTGGCGAG
CCGTCCAGCC ACCCGAACTC GCGGTTCTGC ACCCCGATCA CCCAGTGCCC GATCATCGCC
GACGAGTACT TCGAGCCGGT CGGCGTACCG ATCTCGGCCA TCCTGTTCGG CGGCCGCCGC
AAGACCACGA TCCCGCTGGT CACCCAGTCC CGGGACTGGC AGCACGGCGT GTTCATGGGG
GCGACGCTGT CCTCGGAGAC CACGGCCGCC GCCACCGGCG CGGTCGGGGT CGTCCGCCGC
GACCCGATGG CCATGCTGCC GTTCATCGGC TACAACGCCG GCGACTACTT CGCCCACTGG
ATCGACATGG GCAAGGGTGC GGACGAGAGC AAGCTGCCCA AGATCTTCTA CGTGAACTGG
TTCCGGCGCG ACGCCGACGG CGGCTTCCTG TGGCCGGGCT TCGGGGAGAA CTCCCGCGTG
CTCAAGTGGG TCATCGAGCG GCTTGACGGT TCGGCCGCGG CCGTGGAGAC CCCCATCGGG
CACGTTCCCG GTGAGGGTTC GCTGGACGTC GACGGCCTGG GGCTGACGGC CGACGAGCTG
GCCGCGGCGC TGACCGTGGA CCGCGAGGAG TGGGCGGCGG AGATCCCGCT GATCGAGGAG
TGGTTCGCCA AGATCGGCGA CTCGGTTCCG ACCTCCCTGC GCGACGAGCT CGACTCGCTC
AAGCTGCGGC TGGGTCTGAG CTGA
 
Protein sequence
MTAVIRPTDE ATGAAEIPAT SISGSFSAGP GVPAGIKVEG APAGTSPALL SWVLEVAELT 
RPDRVVFTDG SDQEWDRLIE HMLGTGTITK LAAKENSYWA ASDPTDVARV EDRTYICSVD
PADAGATNNW MDPTAMKSIM TALYEGCMTG RTMYVMPFCM GPYDAPNPKL GVEITDSEYV
VASMRIMTRM GTKALELINA GNPWVKALHS IGAPLAPGQQ DVPWPCNDTK YIVQFPEERT
IWSFGSGYGG NALLGKKCYS LRIASVMARD EGWLAEHMLI LKITSPAGKV DYLAAAFPSA
CGKTNLAMLE PTIPGWKVET LGDDIAWMTF GEDGRLYAVN PEYGLFGVAP GTGWNTNPNA
MRTIAQGNSL FTNVALTDDG DIWWEGLTEE PPAHLTDWKG RDWTPSGLDE HGRRLDSAGE
PSSHPNSRFC TPITQCPIIA DEYFEPVGVP ISAILFGGRR KTTIPLVTQS RDWQHGVFMG
ATLSSETTAA ATGAVGVVRR DPMAMLPFIG YNAGDYFAHW IDMGKGADES KLPKIFYVNW
FRRDADGGFL WPGFGENSRV LKWVIERLDG SAAAVETPIG HVPGEGSLDV DGLGLTADEL
AAALTVDREE WAAEIPLIEE WFAKIGDSVP TSLRDELDSL KLRLGLS