Gene Namu_5310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5310 
Symbol 
ID8450943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5937219 
End bp5938226 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content71% 
IMG OID645044343 
ProductTransketolase central region 
Protein accessionYP_003204565 
Protein GI258655409 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones93 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CCACGACCAC CTTGGCCAAG GCCCTCAACG CCGGGCTGCG CGCGGCCATG 
GACGACGACC CGAAGGTCAT CGTGATGGGC GAGGACGTCG GCCGGCTGGG CGGCGTGTTC
CGGGTGACCG ACGGGCTGCA GAAGGACTTC GGCGACCACC GGGTGCTGGA TACCCCGCTG
GCCGAGTCCG GCATCGTCGG CACCGCGGTC GGCCTGGCCA TGCGCGGCTA CCGGCCGGTT
GCCGAGATCC AGTTCGACGG CTTCGTCTTC CCCGCGTTCG ACCAGATCTC CTCCCAGGTC
GCCAAGATCA CCTACCGGAC CCAGGGCGCC TGGTCGATGC CGATGGTCAT CCGGATCCCG
TTCGGCGGCG GCATCGGTGC CGTCGAGCAT CACGCCGAGT CGCCCGAGTC GTTCTTCTGT
CACATCGCCG GGCTCCGGGT GGTCGCCTGC TCGAACCCGC AGGACGCCTA CGACATGCTG
CGGGCGGCCA TCGCCTGCGA CGACCCGGTG ATCTTCTTCG AACCGAAGCG GCGCTACTGG
GAGAAGGGCG ACCTGGATCC CGACCGGTAC CCCCGGCACC GGCCCGGCGA CCCGTGGCCG
CCGCCCTGCC TGACCAGCGT GGTTCGCCGG CCCGGCACCG ACGTCACCGT GGTCTCCTAC
GGCGCGAGCA TGCCGATCCT GCTGTCGGCG GCTGACGCGG CCCAGGCCGA GGGCCGCTCG
TTGGAGGTCA TCGACCTGCG CACGCTGTCC CCGCTGGATC TGGATCCGGT GCTGGCTTCG
GTCCGCAAGA CGGGCCGGCT GGTCGTGGTG TCCGAGGCGC CGCGGGAGTC CTCGATCACC
GCCGACATCG CCGCCCGGGT CACCGAGGAG GCGTTCTACT CGCTGGCCGC GCCCGTGCTG
CGGGTCGCCG GCTACGACAC CCCCTATCCC CCCAGCCGGG TCGAGGACGA GTACCTGCCG
GATCTGGACA AGGTCATGCA TGCGGTCGAT CGCGTCCTGG CCTACTGA
 
Protein sequence
MTTTTTTLAK ALNAGLRAAM DDDPKVIVMG EDVGRLGGVF RVTDGLQKDF GDHRVLDTPL 
AESGIVGTAV GLAMRGYRPV AEIQFDGFVF PAFDQISSQV AKITYRTQGA WSMPMVIRIP
FGGGIGAVEH HAESPESFFC HIAGLRVVAC SNPQDAYDML RAAIACDDPV IFFEPKRRYW
EKGDLDPDRY PRHRPGDPWP PPCLTSVVRR PGTDVTVVSY GASMPILLSA ADAAQAEGRS
LEVIDLRTLS PLDLDPVLAS VRKTGRLVVV SEAPRESSIT ADIAARVTEE AFYSLAAPVL
RVAGYDTPYP PSRVEDEYLP DLDKVMHAVD RVLAY