| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5305 |
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| Symbol | |
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| ID | 8450938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5927870 |
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| End bp | 5930314 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645044338 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003204560 |
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| Protein GI | 258655404 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAGGT CGGCGGAAGC GGTCATCGAG GTCGACGGTT CGGCCGGGCC CAGTCGCGTC
GACTGGCGGC GGCCGGCGGC GGTCGTGGCC GGCGTGATCA CCGGGATCCT GGTGCTCGCC
GGGCTGCTGT CCGCCCTGCT CTACGGCGCC GACTCGGACC CGTCCGGCCT GGTCTCCAAC
CTGGCCCAGC TGACCGCGGC GGCCCTCGCG ACGGCGGCCG CGGCCGGCGC GGCCCGGCGG
TCCGAACCCG CCGGCCGGCT CCGGTGGTGG CTGGTCGCGC TGGCCTGCGG CTTGTGGACG
ATCGGGCAGA GCTACTGGTG CTACGTGGAG CTGATTCTCG GGCAGGACGT GCCCGAGGTG
TCGCCGGCAG ACCTGTTCTT CCTGTCCTTC ACCGCCCTGA TGATCGTGGC GGTGGCGCCG
ACCGGCGGTT CGCGCAGCGA CCGGCTGCGG ATCCTGCTGG ACGGCTTCAT CATCGGCATG
TCGCTGTTCA CCATCAGCTG GTCGACCTCG ATCGACGCGA TCACCGCCAA TCGCACCCCG
GACACCGAGC CGTTGGCCAT GGTGATCAAC CTGGCCTACC CGTGCGGCGA CGTGGTGGTG
CTGACGATGG CCATCCTGAG CCTGTCCCGC CGCACCGTCG ACCGCAGCGG GCTGACCGCG
GTGGCCGCCG GAATGGGCCT GATCGCCGTG TCCGACGCCT TCTACGCCTA CCTGACCTCC
TCCGGCGAAT CCACCTCGGG TTCGCTCGTC GGGATCGGGT GGGTGGCCGG CTTCGGCCTG
ATCGCCTGCG CCGCCGGGGC CCGCGTCCGG GTCGGCGCCC CCGCACCGGT CGAGCCGCCG
ACCGGTCCCC ATACCGTGAC CGAGACCGGC GGCGAGACCG GCGTCCCGCT CGACGTGCGC
CGGGCCAGCG CCCTGCCCTA CGTCCCTCTC GTGTTGGCCC TGCTGGTGGT GGGGGCCGAC
CGGATCGGCG GGGAACCGGT GGACCGGGTC GCCGGGCCGG CCCTCATCGT GACCTTCCTC
GGGGTGTTGG TCCGGCAGTA CCTGACCATC CGGGACAACG CCGCGCTGAC CGCCAACCTG
GCCCGCCGGG AGAACCAGCT GCACCGGCAG GCGTTCCAGG ACATCCTGAC CGGGCTGCCC
AACCGGGCCC TGTTCACCGA CCGGGCGGCG CACGCTCTGG AGCAGCACCG GCAGAGCATG
CGACCGCTGT CGTTGCTGTT CGTCGACCTG GACGACTTCA AGGCGGTCAA CGACACCCTG
GGGCATCCGG TCGGCGACGA GCTGGTGATC CGGGTGGCCG AGCGGCTGCG GGGCGCGATC
CGGGCCAGCG ACACGGTGGC CCGCTTCGGC GGCGACGAGT TCGCGGTGCT CGCCGAGGGT
GAGGACGCCG ACGGGGTCGA GCTGGGTTCC CGGCTGGTCG AGGCGCTGCG GCCACGATTC
GTGCTCGGCG AGCACGGCCT GTCCATCGGC GCCAGCATCG GCATCGCCGA GGTGCCGGCC
GAGCATCCGA CGCCGACCCT GGACGACCTG TTCTCCCGGG CCGACATCGC CATGTACGCG
GCCAAGCGGG CCGGCAAGGG CCAGATCGCC CTGTACGACT CGACGATGGT GCTGCCGGAG
GCGGCCGACC TGCAGTACCG GCCGCTGCTG ATCGAGGCGA TCGGCAGCGG CGGCATCGAC
TGCGTGTTCC AGCCGATCCT GGACCTGGAC AGCGGCCGGG TGCACTGCAT GGAGGCGCTG
GCCCGCTGGC AGGTCGGCGA CCAGGTGGTG GCCCAGGACT ACTTCATCCA GCTCGCCGGC
CGGCTCAAGC TGCTCCCCGC GCTGACCGAC CTGATGGTCG ACCGGGCCTG CGCCACGCTG
GCCGACTGGA CCGAGCGGCT GGGGTGCGAC GACCTGCGGG TCGGGGTCAA CGTGCCGCCC
GGCCTGATGG CCGACCGCGA CTTCCCCCGG CGCATCGACG CCGCCCTGCG CCGGCACCGG
ATCCGGCCCG ACCGGCTGGT CCTGGAGATC ACCGAGGACG CCCTGATCGG CGACGTCGCC
ACCTCCCGGG CGGTGGCCGA CCAGCTGCGG CTGGCCGGCA TCCGGCTGTG GCTGGACGAC
TTCGGCACCG GCTACTCCTC GCTGCTGAGC CTGCGGCAGA TCTCCCTGCA GGCCGTCAAG
ATCGACATCG AGTTCGTCGC CAACATCCAC ACCGACCCGT CGGCCGCCCA ATTCCTACGC
GCGCTGCTGG CCCTGGGTCG CGACCTGGGC CTGATGGTGA TGGCCGAGGG GGTGGAACTG
CCCGAGCAGG CCGCGGTGCT GGCCGAGCTG GGCTGCCGGT ACGTGCAGGG CTTCCTGTAC
GCCCGGCCGG CCGCGGCCGC CGACCTGGAC GCGATGCTCG CCGCGCAGCC GGCCCTGGCC
ATGGGGGTGC CGGCCGCGCC CACCGTGTCC GCCGGGCGCG GCTGA
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| Protein sequence | MIRSAEAVIE VDGSAGPSRV DWRRPAAVVA GVITGILVLA GLLSALLYGA DSDPSGLVSN
LAQLTAAALA TAAAAGAARR SEPAGRLRWW LVALACGLWT IGQSYWCYVE LILGQDVPEV
SPADLFFLSF TALMIVAVAP TGGSRSDRLR ILLDGFIIGM SLFTISWSTS IDAITANRTP
DTEPLAMVIN LAYPCGDVVV LTMAILSLSR RTVDRSGLTA VAAGMGLIAV SDAFYAYLTS
SGESTSGSLV GIGWVAGFGL IACAAGARVR VGAPAPVEPP TGPHTVTETG GETGVPLDVR
RASALPYVPL VLALLVVGAD RIGGEPVDRV AGPALIVTFL GVLVRQYLTI RDNAALTANL
ARRENQLHRQ AFQDILTGLP NRALFTDRAA HALEQHRQSM RPLSLLFVDL DDFKAVNDTL
GHPVGDELVI RVAERLRGAI RASDTVARFG GDEFAVLAEG EDADGVELGS RLVEALRPRF
VLGEHGLSIG ASIGIAEVPA EHPTPTLDDL FSRADIAMYA AKRAGKGQIA LYDSTMVLPE
AADLQYRPLL IEAIGSGGID CVFQPILDLD SGRVHCMEAL ARWQVGDQVV AQDYFIQLAG
RLKLLPALTD LMVDRACATL ADWTERLGCD DLRVGVNVPP GLMADRDFPR RIDAALRRHR
IRPDRLVLEI TEDALIGDVA TSRAVADQLR LAGIRLWLDD FGTGYSSLLS LRQISLQAVK
IDIEFVANIH TDPSAAQFLR ALLALGRDLG LMVMAEGVEL PEQAAVLAEL GCRYVQGFLY
ARPAAAADLD AMLAAQPALA MGVPAAPTVS AGRG
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