Gene Namu_5297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5297 
Symbol 
ID8450930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5917816 
End bp5919084 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content70% 
IMG OID645044330 
ProductL-lactate dehydrogenase (cytochrome) 
Protein accessionYP_003204552 
Protein GI258655396 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC GCCAGCTGCC CAAGCCCGCC GAACTCGCCG AACTGATGAA GTTCAAGAAG 
CCCGAACTGA ACGGCCGCAA GCGTCGCCTG GACAAGGCCC TGACGATCTA TGACCTGCGC
AAGATCGCCA AGCGCCGGAC GCCGGCCGCC GCGTTCGACT ACACCGACGG AGCCGCCGAG
GCCGAGCTCT CACTGACCCG GGCCCGCCAG GCGTTCGAGG ACGTCGAGTT CCACCCGGAC
ATCCTGCGGC CGGCGCCCGA CGTCAACACC TCCACCACCA TCCTGGGCGA CACCAGCGCC
CTGCCGTTCG GCATCGCCCC CACCGGCTTC ACCCGCCTGA TGCACACCGA GGGCGAGATC
GCCGGGGCCG GGGGGGCCGG GGCGGCCGGC ATCCCGTTCA CCCTGTCCAC CCTGGGCACC
TCCTCCATCG AGGACGTCAA AGCGGCGAAC CCGCACGGCC GCAACTGGTT CCAGCTCTAC
GTCATGCGGC AGCGGGAGAT CTCCTACGGC CTGGTCGAGC GGGCCGCCCG CGCCGGCTTC
GACACCCTGA TGTTCACCGT CGACACCCCC GTGGCCGGCT ACCGGATGCG TGACAAGCGC
AACGGCTTCT CCATCCCGCC GCAGCTGACC CCGGGCACGA TCATCAACGC GCTGCCGCGG
CCGTGGTGGT GGATCGACTT CCTGACCACC CCCACCCTGG AGTTCGCCTC GCTCTCCTCC
ACCGGCGGCA CCGTCGGCGA CCTGCTCAAC TCGGCGATGG ACCCGACCAT CTCCTACGAC
GACCTCAAGG TCATCCGCGA GATGTGGCCG GGAAAGCTGC TGGTCAAGGG CGTGCAGAAC
GTGCCCGACG CCGTGCGGCT GATCGACCAG GGCGTGGACG GCATCATCCT GTCCAACCAC
GGCGGCCGGC AGCTCGACCG GGCGCCGATC CCGTTCCACC TGCTGCCGCA GGTCGTCCGC
GAAGTCGGCC GGGACGCGAC CGTCATGGTC GACACCGGCA TCATGAACGG CGCGGACATC
GTCGCCTCCA TCGCCCTGGG CGCGAAGTTC ACCCTGGTCG GCCGGGCCTA CCTGTACGGC
CTGATGGCCG GTGGGCGCGA GGGCGTGGAC AAGACCATCG CCATCCTGCG CAGCGAGATC
GAGCGCACCA TGGCCCTGCT CGGCGTCTCG ACGCTGGACG AGTTGGAGCC GCGGCACGTC
ACCCAGCTGG CCCGGTTGGT GCCGGTCGCC CCGTCGGTCG CGCAGGCGGC GCTGCCGCTG
GCCCGGTAG
 
Protein sequence
MVKRQLPKPA ELAELMKFKK PELNGRKRRL DKALTIYDLR KIAKRRTPAA AFDYTDGAAE 
AELSLTRARQ AFEDVEFHPD ILRPAPDVNT STTILGDTSA LPFGIAPTGF TRLMHTEGEI
AGAGGAGAAG IPFTLSTLGT SSIEDVKAAN PHGRNWFQLY VMRQREISYG LVERAARAGF
DTLMFTVDTP VAGYRMRDKR NGFSIPPQLT PGTIINALPR PWWWIDFLTT PTLEFASLSS
TGGTVGDLLN SAMDPTISYD DLKVIREMWP GKLLVKGVQN VPDAVRLIDQ GVDGIILSNH
GGRQLDRAPI PFHLLPQVVR EVGRDATVMV DTGIMNGADI VASIALGAKF TLVGRAYLYG
LMAGGREGVD KTIAILRSEI ERTMALLGVS TLDELEPRHV TQLARLVPVA PSVAQAALPL
AR