Gene Namu_5277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5277 
Symbol 
ID8450909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5894194 
End bp5895192 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content72% 
IMG OID645044309 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003204532 
Protein GI258655376 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGC TGACCGGGCC GACCAACCCG ACCACCGACG CCAACTGGGC CGATCCCCAG 
CCCCGGAAGG GCTTTTTCAC CGACACCTCG ATCTGTATCG GCTGCAAGGC CTGCGAGGTC
GCCTGCAAGG AGTGGAATCA CAACCCCCGC GACGGCGACC TGCAGTTGCT GGGCTCCTCC
TACGACAACA CCGGCTCGCT CGGGGCCAGC ACCTGGCGGC ACGTCGCGTT CATCGAGCAG
GACGGCGACC GGATCGAGCA GGCCCGCGAG TCCGGCCGGG CCCTGGTCGG GTTGGGCATG
CCGGCGGTGC GCTCGTCGGC CGCGCCGGTC GACACCACGC CCCCGGACAC CGCCGAGTTC
CGCTGGTTGA TGTCCTCGGA CGTGTGCAAG CACTGCACGC ACGCCGGCTG CCTGGACGTG
TGCCCGACCG GCGCGCTGTT CCGCACCGAG TTCGGCACCG TGGTGATCCA GGCCGACGTG
TGCAACGGCT GCGGCACCTG CGTGGCCGGG TGCCCGTTCG GCGTGGTCGA ACGGCGCGAC
GACGGCACCT ACTCCACCCA CGCCAGCCGC CCCGGGCAAC CGGAGGCGCA CACCGAGGTG
CCGAACCACA ACGTCGCCCA GAAGTGCACG CTGTGCTACG ACCGGATCCT GGAGGGCCAG
ACGCCGGCCT GCGCGCAGAC CTGCCCGACC ACCTCGATCA AGTACGGCGA CCATGACGAC
CTGGTGGCGC AGGCCCGGCA GCGAGTCGGC GAGCTGCACG CCCAGGGGAT GACCGAGGCG
CGGCTATACG GCGCCAACGA GCTCGACGGC GTCGGCGGCA CCGGGTCGAT CTTCCTGCTG
CTGGACGAGC CCGAGGTCTA CGGGTTGCCG CCGGACCCGC GGGTGCCGAC CGCCGACCTG
CCGCGGATGT TCAACCGGGC CGGCATCGCC GCCGTCGGCA TGCTCGCCGC CGCGGCCCTG
TCCTTCCTGA CCGGACGCGG GACGGGCCGG CGCCGGTGA
 
Protein sequence
MGQLTGPTNP TTDANWADPQ PRKGFFTDTS ICIGCKACEV ACKEWNHNPR DGDLQLLGSS 
YDNTGSLGAS TWRHVAFIEQ DGDRIEQARE SGRALVGLGM PAVRSSAAPV DTTPPDTAEF
RWLMSSDVCK HCTHAGCLDV CPTGALFRTE FGTVVIQADV CNGCGTCVAG CPFGVVERRD
DGTYSTHASR PGQPEAHTEV PNHNVAQKCT LCYDRILEGQ TPACAQTCPT TSIKYGDHDD
LVAQARQRVG ELHAQGMTEA RLYGANELDG VGGTGSIFLL LDEPEVYGLP PDPRVPTADL
PRMFNRAGIA AVGMLAAAAL SFLTGRGTGR RR