Gene Namu_5262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5262 
Symbol 
ID8450893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5876153 
End bp5878366 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content67% 
IMG OID645044293 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003204517 
Protein GI258655361 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTGGT GGTCGTGGGT GCTCGGGCTG ATCGCGGTGG CGTTCATCGT GGTCGGTTTC 
GGCATGCTGA TCCGGGCCGG GGTGCAGATG TTCGCGCATG TCCGGTTGGG GGCGCCGGAT
CCGCATCGGG CCGGTCCGGT CGGGGCGCGG CTGAGGACCT TGGTCAAGGA GTTCCTGGGG
CATACCCGGA TGCTCAAGTG GGGCTGGGTC GGGGTCGCGC ACTGGTTCGT GATGATCGGG
TTCGGCGCGC TGTTTTTGAC GTTGGTGCAG GCGGTCGGGG AAACGTTCGA TCCGGAGTTC
GAGATTCCCT GGCTGGGTTA TCAGGCCTGG TACGGGTTGT TCGTCGAGTT GATCGCGCTG
ACCACGGTGC TGGGCATCGG GTATCTGATC GTGGTCCGGC AGCTGAATCA TCCGCGGCGG
GTCGAGCGGG TTTCCCGGTT CCAGGGGTCG AATTTCGGGC AGGCGTATTT CGTCGAGTCG
GTGATCCTGA GCATCGGGGT GCTGATCTTC CTGATCCGTG GGTTTGCCTC GGCTAACGGG
TTCCTGCCGT ATCCGACGTG GGCGGCGCCG ATCTCGACGT GGTTGGGGTC GTGGTTGCCG
GCGTGGCCGG CGGCGGTGTC GGTGGCTGCG TTGGTCAAGG TGATCGTGTC GATGGTGTGG
GCGATCGTGA TCGCCCGGAA TCTGTCGATG GGGGTGGCCT GGCACCGGTT CCTGGCGTTC
TTCAACATTT ACTTCAAGCG TGAGGACGAC GGGTCGACCG CGTTGGGTGC GTTGCGGCCG
ATGCTTTCCG GTGGTGAGGT GCTCAACCTG GAGGAGGCCG ACCCGGAGGT CGACACGTTC
GGCGTGGGCA AGGTCGAGGA CTTCTCCTGG AAGGGCTGGT TGGACTTCGC GACGTGCACC
GAGTGCGGGC GTTGCCAGTC GCAGTGCCCG GCGTGGAACA CGGCCAAGCC GCTGTCGCCG
AAGCTGCTGG TGCTCTCGCT GCGGGACCAT TCGTTCGCCA AGGCGCCGTA CCTGGCCGCG
GGTGGGGGCA CCGCCCCGGA CGGGGCGGAG AAGATGGGTG AGGCGGAGTT GGCGGCGTTC
GCCCACGCTG ATCCGTTGGC GATGCTGGAG GCGGGCCGGC CGTTGGTCGG TGGCCCGGAC
GTCGACGCCG ACGGGAACCA GATCGGTGGG GTGATCGATC CGGGGATCTT GTGGGACTGC
ACGTCGTGCG GGGCGTGTGT GGAGCAGTGT CCGGTGGACA TCGAGCATGT CGATCACATC
GTGGACATGC GCCGCTACCA GGTGATGATC GAGTCGGAGT TCCCCTCGGA GCTGGGCGGG
TTGTTCCGGA ACCTGGAGAA CAAGGGCAAT CCGTGGGGGC AGAACAGCAA GGACCGGATG
GCCTGGGCCA AGGACCTGCC GTTCGAGGTG CCGGTGGTGA CCGACACGAT CGACCCGGAT
CACGAGTACC TGTTCTGGGT CGGCTGCGCC GGCGCGTTCG ACGATCGGGC CAAGAAGACG
ACCCGGGCGG TGGCCGAGTT GATGCACATG GCCGCGGTCG GGTTCGCGGT GCTGGGCACC
GAGGAGACCT GCACCGGTGA TCCGGCGCGG CGGGCGGGCA ACGAGTTCCT GTTCCAGATG
CTGGCCCAGG CCACGGTCGA GACGATCAAC ACCGCGTTCG GGGACCGGGC GACCCGCAAG
ATCGTGGTGA CCTGCCCGCA CTGCTTCAAC ACCCTGGGCA ACGAGTACGG CGACCTGGGT
GGGCATTACG AGGTCATCCA CCACACCCAG CTGCTCAACA AGCTGGTCCG GGACCGGCGG
CTGGTGCCCA AGAAGCCGGC CGCTTCGCGG GACGTGACCT ACCACGACCC GTGTTACCTG
GGCCGGCACA ACAAGGTCTA CACGCCGCCA CGGGAATTGA TCGGCGCGAC CGGGGTCACC
CTGGCCGAGA TGCCGCGCAA CAGCGCCCGG TCGTTCTGCT GCGGGGCCGG CGGCGCGCGG
ATGTGGATGG AGGAGAAGAC CGGCAAGCGG ATCAACCTGG AACGCACGGA CGAGGCGTTG
GCCACCGGCG CGGACACCAT CGTCACCGGC TGCCCGTTCT GCCGGGTCAT GCTCACCGAC
GGCCTGACCG CCCGGCAGAA CACCCCGACC GAGACCACCC CCGCCGACGT GGCCGACGTG
GAGGTCATGG ACGTCGCCCA GATGCTGCTG GCCGGCATCA AGGGCCAGGA CTGA
 
Protein sequence
MMWWSWVLGL IAVAFIVVGF GMLIRAGVQM FAHVRLGAPD PHRAGPVGAR LRTLVKEFLG 
HTRMLKWGWV GVAHWFVMIG FGALFLTLVQ AVGETFDPEF EIPWLGYQAW YGLFVELIAL
TTVLGIGYLI VVRQLNHPRR VERVSRFQGS NFGQAYFVES VILSIGVLIF LIRGFASANG
FLPYPTWAAP ISTWLGSWLP AWPAAVSVAA LVKVIVSMVW AIVIARNLSM GVAWHRFLAF
FNIYFKREDD GSTALGALRP MLSGGEVLNL EEADPEVDTF GVGKVEDFSW KGWLDFATCT
ECGRCQSQCP AWNTAKPLSP KLLVLSLRDH SFAKAPYLAA GGGTAPDGAE KMGEAELAAF
AHADPLAMLE AGRPLVGGPD VDADGNQIGG VIDPGILWDC TSCGACVEQC PVDIEHVDHI
VDMRRYQVMI ESEFPSELGG LFRNLENKGN PWGQNSKDRM AWAKDLPFEV PVVTDTIDPD
HEYLFWVGCA GAFDDRAKKT TRAVAELMHM AAVGFAVLGT EETCTGDPAR RAGNEFLFQM
LAQATVETIN TAFGDRATRK IVVTCPHCFN TLGNEYGDLG GHYEVIHHTQ LLNKLVRDRR
LVPKKPAASR DVTYHDPCYL GRHNKVYTPP RELIGATGVT LAEMPRNSAR SFCCGAGGAR
MWMEEKTGKR INLERTDEAL ATGADTIVTG CPFCRVMLTD GLTARQNTPT ETTPADVADV
EVMDVAQMLL AGIKGQD