| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5260 |
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| Symbol | |
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| ID | 8450891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5871616 |
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| End bp | 5874897 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645044291 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003204515 |
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| Protein GI | 258655359 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATTCC GCTCACTGTC CGGGCTCTGG GACAGTGATG AGGTGTATGT CGGGATCCTG
GGCCCGCTCC AGGTGCAGGC GGGCGACGGG CCGGTGCCGA TCGCCGGTAC CCGGCTGCGC
GCGCTGCTGA CCCGGCTGGC CGTGGCCGCC CCGGAGCCGG TGTCGGTCGC CGAGCTGGTG
CAGGCCCTCT GGCCGGGTGA GCCGCCCGGG GACCCGACGA ATGCGTTGCA GTCGTTGGTG
TCCCGGGTGC GGCGGGCCTT GGGCGACGCG GCCCGCATCG AACAGGTGCC CGGCGGGTAC
CGGCTGACCG TCGAGGGCGC CGAGGTCGAC GCCGCCGTGT TCGGCGAGCT GGTCGCGACC
GGGCGCCGGG AGCTGCAGCG GGACCGACCT GCGCAGGCCC AGGATCTGCT CACCCGGGCC
CTGTCCCTGT GGCGGGGTGA GCCGCTCGCC GACGCGGCGG ACGGCCCCTA CGCGACGGCG
ACCCGGGCCC GGCTGCAGGA GCTGCGACTG GATGCCCAGG TCGACCTGAT CGAGGCGCAG
CTGCGGCTGG GCCGGTCGGC CGACGTGATC GCCGACCTGG AACAGCTGGT GGCGACCCAC
CCGCTGCGCG AGCGGTTGGC CGCCCAGCTG ATGCGCGCCC TGGCCGCGAC CGGCCGTCAG
GCCGACGCCC TGGCCGTCTA CGAACGGCTG CGCGACCGGC TGGCCGGCGA GCTCGGGGTC
GACCCGGGCG CGGACACCCA GTCGGTGCAC CTGGCCGTGC TGCGCGGTGA GATCGCCGCC
GAACCGGCCG TGGCCCCCGC GGCGAACAAC CCGTTGCGGC GCCGGACCAA CCTGCGGGCC
CCGCTGACCC GGCTGATCGG GCGCGATGCC CAGGTTCGGC GGATCACCGA CCTGCTGGCC
GACGGGCGGC TGGTGACGGT GGTAGGTCCG GGCGGGGCCG GCAAGACGCG GCTGGCCCAG
GAGGTGGGCC GGACCGACGC CGCTGCTCGC CCGGACGGGG TATGGCTGGT CGAGCTGGCC
TCGGTGACCG AGCCGAAGGG CATCGGGCCG GCGATGATCG GGGCCCTGGG CCTGCTGGAC
ACCCGGGCGG TGGACCGGCG CAGCGATCGG GCGGCCCGAG ATTCGATCGA GTACCTGATC
GACGTGCTCG CCGAGGCCGA CTGCCTGCTG GTGCTGGACA ACTGCGAGCA CCTGGTCGCG
GCCGTCGCCG ACCTGGTCGA TGCGCTGCTG GCGGCCAGCC CGCGGCTGCG GGTGCTGGCC
ACCAGCCGGG AGCCGTTGGG CATCGTCGGC GAGTCGTTGT GCCTGGTGCC GCCGCTGGGC
CTGCCACCGG TTGGCGCGAC GGCGGCCGAG GCGGCCGGTT ATCCGGCGGT CCGCCTGCTG
GTCGAGCGCG GGCATGCGGT GACCTCCGAG TTCGAGGTGA GCCCGGCCAC CGTCGAGGCC
GTCGTGGAGA TCGTCCGGCG GCTGGACGGT CTGCCGCTGG CCATCGAGCT GGCCGCCGCG
CGGCTGCGGG TGATGCCGGT CGGCGAGATC GCGGCGCGGC TCTCGGACCG GTTCCGCCTG
CTCACCGGGG GGAGCCGGAC CGCCCTGCCC CGGCACCGGA CCCTGCGGGC GGTGGTCGAG
TGGAGCTGGG AGTTGTTGCG CCCCGCGGAG CGGCTGCTGG CCGAGCGGCT CGCCGTCTTC
CCGGCCGGCG CCACCCCGGC CGCGGCCGCC GCGGTCTGCG GCGACGCCCG GTTGCCCGGG
ACCGACGTCG CCGACCTGAT GCTCTCGCTG GTCGACAAGT CGTTGCTCAC CGTCACCGGC
GGGTCGGTCG TGCGGTACCG GATGCTGGAG ACGATCCGCG AGTACGGGGT GGAGCGGCTG
GCCGACCGGG GCGAGGCGGC CGCGGCCCGG GCGGCGCACG CCCGGTACTA CGCCGCACTC
GCGGGCCGGA CCGATCCGCT GCTGCGGACG GGGGAGCAGC TGGCCGCCAT CGCCGCCCTC
AACGACGAGC GCGACAACAT CGTCGCCGCC GTTCACTACC TGGCCGATTC GGCCGACCCG
GCCGATCGCC GGGCCGCTCT GGCGCTGGTG CTGCACATGT CCTGGTACTG GCAGATGACC
GGGGCGACGG CGGAGGCCTC CGGGTTGCTG GCCGTGGCGA TGGCCGCGAC CGCCGACGAC
GAGCAGGATC CGCTCCGGCC CTGGGCGCAG GCATTGCTCA CCCTGGTCGA CACGTTCGCC
GGCGTGGGCG CGAGCTCGGC GATGGCGGAT TTCCGGGCCG AGTCCGGACG GATCGCCCGG
GCCCTGCTGA CCGCGGGACC GCCGCCCTCC TCGTGGTTCG CCATGGTGCC CACGATGCTG
GCCCTGTTCG CCAACGACGC CGACCTGGTC GCCCAGGCGG CCGCGTCGAG CTGGGCGACC
GATCCGTGGA CGCGGGCCGC GCTGGCCATG GGCCGGGCCC TGTTCGCCGA GAACGAGGGA
CGCCCGGCCG ACATGCGGGC CGACATCGAC CTCGCGCTGG CCGGCTTCGA GGCGATCGGC
GACCGCTGGG GCCAGTCGTC GGTGCTTTCC AGCCGCGGCA ACCTGCGGGC CACGAGCGGC
GACATCGACG GTGGCATCGC CGACTACGAG CGGGCGCTGA CCCTGTCCCG CGAGCTGGGG
GCGGCCGAGG ACGAGGCGAT GATCCAGCTC CGGCTGGCCG GCCTGCTGAT GCGGGCCGGC
GACCTGCGTC GGGCGCAGGA TCTGGTCGCC CAGGTCCACG ACCCGCTGGA CGAGCGCACG
CCCGGATTCG ACCGGCGGCT GTTCGCGGCC GGCATGCAGG CGATGATCAG CCTGCTGGCC
GGGGACCTGG CCGGCGCGCA GGCTCAGGCG ACGCAGCTGC GCGGGGACTG GCAGCGGCGC
GGCGCGGACC CTCTGCAGAG TCATGCGGTG GCGTTCGTCG TCGCCGCGAC CGCGGTGGTG
GCCGTGCACG CCGGGGACGT GGACACCGCC GTCGCCGACG TGCGGACCGG TTACCCGATC
GCCCTGCGCA CCGAGGACAT GCCGGTGGTG GCCACGCTGG GGGTGGCGGT GGCCTGGGTC
GCCGCCGCCG TCGGCCATCC GGATCGGGCG GCGGTGGCCC TGGGTGCGTC GGCCCGGTTG
CGCGGTAGCG ACGATCCGGG GGATCCGGTG GTGGCCCGGC TGATCGCGCG CCTGCGCGGG
GATCTCGGCG AGGCCTATGC CGAGCACTAC GGCCGGGGCG GCGCGCTCAC CCGGGCGGGC
GCGGTCGAGG CCATCGACCC CGACCACGCC CTGGGCCGCT GA
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| Protein sequence | MIFRSLSGLW DSDEVYVGIL GPLQVQAGDG PVPIAGTRLR ALLTRLAVAA PEPVSVAELV
QALWPGEPPG DPTNALQSLV SRVRRALGDA ARIEQVPGGY RLTVEGAEVD AAVFGELVAT
GRRELQRDRP AQAQDLLTRA LSLWRGEPLA DAADGPYATA TRARLQELRL DAQVDLIEAQ
LRLGRSADVI ADLEQLVATH PLRERLAAQL MRALAATGRQ ADALAVYERL RDRLAGELGV
DPGADTQSVH LAVLRGEIAA EPAVAPAANN PLRRRTNLRA PLTRLIGRDA QVRRITDLLA
DGRLVTVVGP GGAGKTRLAQ EVGRTDAAAR PDGVWLVELA SVTEPKGIGP AMIGALGLLD
TRAVDRRSDR AARDSIEYLI DVLAEADCLL VLDNCEHLVA AVADLVDALL AASPRLRVLA
TSREPLGIVG ESLCLVPPLG LPPVGATAAE AAGYPAVRLL VERGHAVTSE FEVSPATVEA
VVEIVRRLDG LPLAIELAAA RLRVMPVGEI AARLSDRFRL LTGGSRTALP RHRTLRAVVE
WSWELLRPAE RLLAERLAVF PAGATPAAAA AVCGDARLPG TDVADLMLSL VDKSLLTVTG
GSVVRYRMLE TIREYGVERL ADRGEAAAAR AAHARYYAAL AGRTDPLLRT GEQLAAIAAL
NDERDNIVAA VHYLADSADP ADRRAALALV LHMSWYWQMT GATAEASGLL AVAMAATADD
EQDPLRPWAQ ALLTLVDTFA GVGASSAMAD FRAESGRIAR ALLTAGPPPS SWFAMVPTML
ALFANDADLV AQAAASSWAT DPWTRAALAM GRALFAENEG RPADMRADID LALAGFEAIG
DRWGQSSVLS SRGNLRATSG DIDGGIADYE RALTLSRELG AAEDEAMIQL RLAGLLMRAG
DLRRAQDLVA QVHDPLDERT PGFDRRLFAA GMQAMISLLA GDLAGAQAQA TQLRGDWQRR
GADPLQSHAV AFVVAATAVV AVHAGDVDTA VADVRTGYPI ALRTEDMPVV ATLGVAVAWV
AAAVGHPDRA AVALGASARL RGSDDPGDPV VARLIARLRG DLGEAYAEHY GRGGALTRAG
AVEAIDPDHA LGR
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