Gene Namu_5255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5255 
Symbol 
ID8450886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5865318 
End bp5866463 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID645044286 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003204510 
Protein GI258655354 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA GGATCTATCT GTCGAAGGCA GAGGTCACCG AGGTCGAAGA GAAGTTCGTG 
CTCGGAGCGC TGCGATCCGG CTGGATCGCG CCGCTCGGAC CCGATGTCGA CGCCTTCGAA
GCCGAGGTCG CCGAGTACGT CGGAGTACAA GGCGCGCTTG CGCTCTCGTC GGGAACGGCG
GCCCTGCACC TGGCCTTGCT CGAGGTCGGG GCCGGGCCCG GTCGTGTGGT TCTCGTGCCC
ACGATGACCT TCGCCGCCAC GGCCAACGCG GTGGTCTACA CGGGCGCCGA ACCGGTCTTC
GTGGACTCCC AGGCCGTGGA CGGCAATGTC GACCCGCAGC TACTGGTGCA AGCGGTCGAC
CTGCTGCGCG CGCAGGGCGC GGATATTGCC GCCGTGGTCA TGGTGGATCT CTTCGGCCGG
TGCGCCGACT ACCCGGAGAT TCTTCCGGCA ATGCAAGAGC GCGGGATCCC GGTCATCTCC
GATGCCGCCG AGTCACTCGG TGCTGCGATC GGAGGCCACC GGGCCGGGTC ATTCGGACGG
GCTGCGGCCT TGTCGTTCAA CGGCAACAAG ATCATGACCA CGTCGGGTGG CGGGATGCTC
CTCAGCGACG ACCTCGACCT CATCGCCCGC TGCCGGTACC TGTCGACGCA GGCTCGGCAA
CCGGTCGTGC ATTACGAGCA CACCGAGATC GGTTACAACT ACCGGCTGTC CAACATCCTG
GCCGCCCTCG GCCGGGGCCA GTTGTCGCGG CTGGACTGCA TGATCGAGCG GCGGCGAGCA
ATCCGCGAAC GGTACGTCGA AGCGCTGGGC CACCTGCCCG GCGTCCGGTT CCTGGGCCGC
ACCGCAAGTG GGCGTTCGGA CCACGCCGAC AACTGCTGGT TGACCACCCT GGTCCTGGAT
CCGCGCCTGG TCTCGGCCAC GCCCACGATG ATCATTGAGG CGCTGGCGGC GCAAAACATC
GAAGCCCGTC CGCTGTGGAA GCCGATGCAC CTGCAACCGG TGTTCCTGCA CGCCCGGGCC
TATTCCAACT CCGTCTCGAT CCGGCTGTTC CAGACCGGGT TGAGCCTGCC CAGCGGCTCG
GGTCTGTCGG ACGACGATGT CGACCAAGTG CTGCTCGCGG TCGAAGCATG TCTCAAGGTC
GGGTAG
 
Protein sequence
MTTRIYLSKA EVTEVEEKFV LGALRSGWIA PLGPDVDAFE AEVAEYVGVQ GALALSSGTA 
ALHLALLEVG AGPGRVVLVP TMTFAATANA VVYTGAEPVF VDSQAVDGNV DPQLLVQAVD
LLRAQGADIA AVVMVDLFGR CADYPEILPA MQERGIPVIS DAAESLGAAI GGHRAGSFGR
AAALSFNGNK IMTTSGGGML LSDDLDLIAR CRYLSTQARQ PVVHYEHTEI GYNYRLSNIL
AALGRGQLSR LDCMIERRRA IRERYVEALG HLPGVRFLGR TASGRSDHAD NCWLTTLVLD
PRLVSATPTM IIEALAAQNI EARPLWKPMH LQPVFLHARA YSNSVSIRLF QTGLSLPSGS
GLSDDDVDQV LLAVEACLKV G