| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5248 |
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| Symbol | |
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| ID | 8450879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5856910 |
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| End bp | 5858763 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645044279 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003204503 |
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| Protein GI | 258655347 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 73 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCGGA ACGTGAGCGG TCTGATTGCC CGCATGTCAA GCCATCGACA CTTTTGGTTG
CTCCTGTTCG ACTCGACGGT CTGGGTATTG GCCGTCGGGT TCGCTGCCGT TGCCCGGATG
GACTTCCAGT TCGTTCAGGT CGGTTGGCCA TCGACGATGG TGCTCGCCGC CATCTGTGTC
GTGACATTTG CGATCGTGGG GTGGATCTCG CGTCTGCATG AAGGCCGCGC CCCGCTTGGC
AGCCTGGACG AGACGATCCG GCTGGCCTCT GCCGTGCTGT GCGTCGGGGT CGCCGTTTAC
TTGGCCAACC TGCTCTTTCT GCACCTCGTC CCGCGATCGG TGCCACTGAT TGCAACGCTG
GTGGCGGTCA TTGTGATGGC GTGGGGGCGG GCCCTCGTGC GGGCCATCCG CGACAGTTGG
AGCATCACCG ATACGGCCGG GCGCGGGCAG CCGGTGCTGG TGATCGGTGC CGGTGACGGC
GGACGGCAGC TAATCAGGTC GATGCGTCGG GATCCAGCGT CGCGGTGGTC ACCGGTTGGG
ATCCTCGACG ACGATCGACA CAAGCGGCAC CTGCGCATCG ACGGTGTTCC GGTCCTGGGC
ACGATTGCCG AGTTGGCGAC CGTGGCCCAC GAAAGTGATG TGTCGACGGT CGTTGTGGCC
ATCCCCAGCG CGCCGGCCTC ACTGCTGCAG GACATCTCCA ATCAAGCAGC GGACGCCCAG
CTGACGGTCA AGATCTTGCC CGGCGTGGAG GAGTTGCTCG GTGGACGGGC CGGGATCAAA
GATGTCCGCG ATATCAACAT CCCCGACCTG CTCGGTCGCC GCCAGATCGA CACGGACGTC
GCCGCCATCG CCGGCTACCT GACCGGCCAA CGGGTGTTGG TGACTGGGGC CGGCGGCTCG
ATCGGATCGG AACTGTGCCG TCAGATCAGC CGGTGGAGCC CGGCCCACCT CATCATGCTG
GACCGGGATG AATCCGCGCT GCACGCGGTG CAGTTGTCGA TCGAAGGCCG AGCCCTGCTC
GATTCCAGCG ACATCATTCT GGCCGACATC CGGGATCGCG ACCGGATCAT GGGCATCTTC
CGGGAGCATC GTCCCCAGGT CGTCTTTCAC GCCGCGGCCC TCAAGCACCT GCCCATGTTG
GAGCAGTACC CGGCCGAGGC CGTCAAGACC AACATCTGGG GTACCCAGAC CGTGCTCGAG
GCGGCCGCCG CCGTCGACGT CGAACGATTC GTCAATATCT CCACCGACAA GGCAGCGAAT
CCGGTCAGCG TGCTGGGCTA CTCCAAACGG ATCGCCGAGG GCCTCACGGC GGCCATGGCC
GTGCGGGCCA CTGGCACCTA CCTCAGCGTT CGCTTCGGCA ACGTCTTGGG TAGCCGCGGT
TCGGTGCTCA CCGCGTTCGC CGCGCAGATT GCCGCCGGCG GTCCCGTCAC GGTCACCCAC
CCCGACGTCA CTCGGTTCTT CATGACCGTC AACGAGGCCG TTCAGTTGGT GATTCAGGCC
GCTGTGCTCG GGCACGACGG CGAGGCCCTC GTCCTCGACA TGGGAGAGGC GGTGCGCATC
GACGCCATGG CCCGGCAGCT CATCGCGCTG TCCAAGCAGG ACATCGCGGT CGAGTACACC
GGGCTCAGGG ACGGCGAAAA GATGCATGAA GATTTGCTGG GCCATGACGA GCCGGACCTG
CGCCCCATGC ATCCCCTTGT CTCCCATGTC GATGTCCCCC CGCTAGTTTC CGACCACCTT
GTTCCTATCG ACATAGCCCA ACCCGCCACG ATTACCAACG CTCTTGGCGC TCTATGCACC
GCAATGACAA GAAACAAGGA GATTATCTGC GATGACGAAC TCCTCCCACG CTGA
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| Protein sequence | MHRNVSGLIA RMSSHRHFWL LLFDSTVWVL AVGFAAVARM DFQFVQVGWP STMVLAAICV
VTFAIVGWIS RLHEGRAPLG SLDETIRLAS AVLCVGVAVY LANLLFLHLV PRSVPLIATL
VAVIVMAWGR ALVRAIRDSW SITDTAGRGQ PVLVIGAGDG GRQLIRSMRR DPASRWSPVG
ILDDDRHKRH LRIDGVPVLG TIAELATVAH ESDVSTVVVA IPSAPASLLQ DISNQAADAQ
LTVKILPGVE ELLGGRAGIK DVRDINIPDL LGRRQIDTDV AAIAGYLTGQ RVLVTGAGGS
IGSELCRQIS RWSPAHLIML DRDESALHAV QLSIEGRALL DSSDIILADI RDRDRIMGIF
REHRPQVVFH AAALKHLPML EQYPAEAVKT NIWGTQTVLE AAAAVDVERF VNISTDKAAN
PVSVLGYSKR IAEGLTAAMA VRATGTYLSV RFGNVLGSRG SVLTAFAAQI AAGGPVTVTH
PDVTRFFMTV NEAVQLVIQA AVLGHDGEAL VLDMGEAVRI DAMARQLIAL SKQDIAVEYT
GLRDGEKMHE DLLGHDEPDL RPMHPLVSHV DVPPLVSDHL VPIDIAQPAT ITNALGALCT
AMTRNKEIIC DDELLPR
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