Gene Namu_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5233 
Symbol 
ID8450864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5834777 
End bp5835583 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content75% 
IMG OID645044264 
ProductABC transporter related 
Protein accessionYP_003204488 
Protein GI258655332 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones88 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCC GGGCCGATCT GGTGGTCGAG CGGCTGACGG TGGGTTACCC GCAGCGGCGG 
CGGTTCGCCC GGTCCGACCG GGTGGTGCTC GGGCCGGTGT CGGTCCGCGC GGCGGCCGGC
CGGATCACCC TGCTGCTCGG TCCCAACGGC GCCGGCAAGT CCACCCTGCT GCGCTCGATC
GCCGGGTTGC AGCACCCGCT CGGCGGGCAG GTCACGCTCG GCGGGGCCGA TCTGCACGCC
CTCGATCCCC GCACCCGGGC GGCCCGGATG GCGGTGGTAC TGACCGAGCG GTTCGACCCC
GGGCTGTTGC GCGGCGAGGA CGTGGTCGCC CTGGGCCGGT TCCCGCACCG GGCCCGGTCC
GGCTCGTTCA CCGCCGACGA CCGGCGGGCG GTGGCCGAGG CGTTCGCCGC GGTGCACGCG
CAGGAGCTGG CCGACGTCCT GCTGGCCAAG ATGTCCGACG GGCAGCGGCA GCGGATCATG
ATCGCCCGCG CCCTGGCCCA GTCCCCGTCG CTGCTGCTGC TGGACGAGCC GTCGGCGTTC
CTGGACGCAC CGGCCCGGAT CGAGCTGCTG GCCGTGCTGC GCCGGATCGC CGCCGAACGC
ACCATCCCGG TCCTCGCCTC CACCCACGAC GTGGAGGCCG CGGTGCAGCT GGGCCAGGAC
GGCTGGCTGA TCGGTCCGGG TCCGCAGGTG ACCAGCGGCC CGGTGCGGGA GCTGGCCGCG
GGTGGAGCGA TCGGTGCGGC CTTCGACACC GATCAGGTCC TGTTCGATCC GAGTTCCGGA
CGTTTCGGCC TGCGTGGCAT CAGTTGA
 
Protein sequence
MTGRADLVVE RLTVGYPQRR RFARSDRVVL GPVSVRAAAG RITLLLGPNG AGKSTLLRSI 
AGLQHPLGGQ VTLGGADLHA LDPRTRAARM AVVLTERFDP GLLRGEDVVA LGRFPHRARS
GSFTADDRRA VAEAFAAVHA QELADVLLAK MSDGQRQRIM IARALAQSPS LLLLDEPSAF
LDAPARIELL AVLRRIAAER TIPVLASTHD VEAAVQLGQD GWLIGPGPQV TSGPVRELAA
GGAIGAAFDT DQVLFDPSSG RFGLRGIS