Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5225 |
Symbol | |
ID | 8450856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5824719 |
End bp | 5826410 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645044256 |
Product | L-lactate transport |
Protein accession | YP_003204480 |
Protein GI | 258655324 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC CGTATCAGCC CGACATCACT GCTGTCGGCG ACAGTGTTTT TCTCACGGCG ATGGTGTCGA TCATCCCGTT GGCTGTGGTG TTCATCTTCC TGGGTGTGTT GAAGACGAAG GCGCACTTCG CGGCCCTGGC CGGGTTGGCG GCGTCGATCC TGGTGGCGAT CCTGGCGTTC GGGATGCCGG TCGATCTGAC GTTGTTGGGT GCCTCGCAGG GCATCTTGTA CGGGTTGTTC CCGATCATGT GGATCGTGTT GGCGGCGATC TGGCTGTATG AGCTGACGGT GATCAGTGGC CGGTTCGAGG ATCTGCGGAC CGCGTTCAAC CGGATCTCGG ACGATCCCCG GATCCAGGGG ATCATCATCG CGTTCTGTTT CGGTGGGTTG CTCGAGGCGT TGGCCGGGTT CGGCGCCCCG GTCGCGATCA CCGGTGTCAT GCTGGTCTCG CTTGGGTTCT CCCCGATGCG GGCCGCGGCC ACGGTACTGC TGGCCAACAC CGCCCCGGTC GCGTTCGGCG CGATCGGCAT CCCGATCATC ACTGCCGGCA ACCTGACCGG CATCGACTAT CACGAGATCG GTGCGGTCGT CGGCCGGCAG ACCCCGATCC TGGCGATGTT CGTACCGCTG CTGCTGGTGA TGATCGTGGA CGGCAAGCGG GGCATCAAGC AGACCTGGCC GATCGCCCTG GTCTCGGGCA TCTGCTTTTC CATCGCCCAG TTCATCAGCG CCAATTTCAT CTCGGTCGAG CTGACCGACA TCATCGCCTC GCTGGCCGCG CTGGTCTCGG TCGTGGTGAT GCTCAAGTTC TGGAAGCCCA AGGGCACCGT GGAGGCCCGG GAGCGGCTGG CCCTGGCGGC CAAGGAGGAG CACGTCGAGC CGACCGGCGG CCCGTCCGGC GGTAGCGCTC CGGTGGCCAC CGCGGTCTCG ACGGAGAAGT TGACCGCCGG GCGGACCGTG ATGGCGTTCC TGCCCTACAT CGTGGTCATC GTGGTGTTCT CGCTGGCCAA GCTGTTCACC CCGCTCAAGA CGTGGCTGGC CAGCACCGAT ATCAAGTTCG GCTGGCCGGG CTCGGACGGC AACATCTTGA ATCTGGCCGG TAAGCCGTCC ACGGCCACCC AGTACACCCT GGGGTACCTG TCCAACGCGG GCACCCTGCT GATCATCTCC GGGGTGATCG TGATGATCGC CTACCGGATC AAGCCGGGCC TGGCGGTCAA GGAGTTCGGC AAGACCGTCT ACAAGTTGCG GTTCGCGTTG CTGACCGTGG GCAGTGTGCT GGGCCTGGCC TACGTGATGA ACATGTCCGG CCAGACCATC ACCATCGGCC AGTGGCTGGC CGCCGGCACC GGCGCGTTCT TCGCGTTCCT GTCCCCGATC CTGGGTTGGG TCGGCACCGC CGTGACCGGC TCGGACACCA GCGCCAACGC CCTGTTCGCC ACCCTGCAGC AGTCGGCCGC GGAGAAGGCC GGCCTGGACC CGACGCTGCT GGTCGCGGCG AACACCTCCG GCGGCGTGGT CGGCAAGATG ATCAGCCCGC AGAACCTGAC CATCGCCGCG ACCGCGGTCG GCCTGCTCGG CAAGGAATCG GACATCCTGC GCCGCGTCCT GAAGTGGAGC GTCGGGCTGC TGCTGGCCAT GTGCGTGCTG GTCTACCTGC AGAGCAACGT GCTGTCCTGG ATGATCCCCT GA
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Protein sequence | MATPYQPDIT AVGDSVFLTA MVSIIPLAVV FIFLGVLKTK AHFAALAGLA ASILVAILAF GMPVDLTLLG ASQGILYGLF PIMWIVLAAI WLYELTVISG RFEDLRTAFN RISDDPRIQG IIIAFCFGGL LEALAGFGAP VAITGVMLVS LGFSPMRAAA TVLLANTAPV AFGAIGIPII TAGNLTGIDY HEIGAVVGRQ TPILAMFVPL LLVMIVDGKR GIKQTWPIAL VSGICFSIAQ FISANFISVE LTDIIASLAA LVSVVVMLKF WKPKGTVEAR ERLALAAKEE HVEPTGGPSG GSAPVATAVS TEKLTAGRTV MAFLPYIVVI VVFSLAKLFT PLKTWLASTD IKFGWPGSDG NILNLAGKPS TATQYTLGYL SNAGTLLIIS GVIVMIAYRI KPGLAVKEFG KTVYKLRFAL LTVGSVLGLA YVMNMSGQTI TIGQWLAAGT GAFFAFLSPI LGWVGTAVTG SDTSANALFA TLQQSAAEKA GLDPTLLVAA NTSGGVVGKM ISPQNLTIAA TAVGLLGKES DILRRVLKWS VGLLLAMCVL VYLQSNVLSW MIP
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