Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5195 |
Symbol | |
ID | 8450826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 5790122 |
End bp | 5792245 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645044227 |
Product | Alpha-amylase |
Protein accession | YP_003204451 |
Protein GI | 258655295 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC CTGCACTGCG CCGACTGGGT ACCGTCGCGC TGGCTGCCAC CCTGGCGGTG ACCATCAACC AGGTCGTCGC GCCCGCCGCC GCGGCCGAGA CCACCTCGGT CACCGTCGCC GGCTCGTTCG ATCAGGAGAT CGGCTGTGCC GACGACTGGC AACCGGCCTG CGCCGCCGCG CACCTGGACA AGCAACCCAA CGGCCAGTTC GCCAAGACGC TGACCATCCC CGACTCCGGG TCGGGCGCCA CGAGCTACGG GTACAAGTTC GCCACCAACG ACAGCTGGAA CAACCCGAAC TTCGGCCTGC GGGGCGGGTC GGGCGACATC GCCCTGCCGA TCCCGGCCGG CGGCCAGAAC GTCACGTTCG TCTTCGACCC GGTGTCCAAC CTCGGCTCGG ACTCGATCAA CAGCGCCGCC ATCTCCGGCA CCTTCCAGAG GCAGCTCGGC TGCGCGGCCG ACAACACCCT GTCCTGCCCG CAGAGCTGGC TCTACGACGA CGACCACGAC GGTGTCTTCA CGTTGGTCAC CGGGGCCATC GCCCCGGGCA GCTACACGGT GTCGGCGGCC ACCCTGGGCA GCAGCTCGGG GTCGGCGCCG GTGACCTTCA CCGTGCCGGC GGCCGGCGGC GGGGCGACGA CGACGATCAG CTTCGACCCG AAGGCCGGCG CGCCCACCGT GTCGGTGGTC CCGCTGGTCC AGCCGGCCCC GGCGACCTTC AGCCATCCGA CGGCCAAGCG CGGCGACGTG GTGGCCAACC TGTTCGAGTG GAACTGGAAG TCGGTGTCCA CCGAGTGCCA GACCGTTCTC GGCCCGGCCG GTTACGGCGC GGTCCAGGTC GCGCCGCCGC AGAACTCCAT CAACAACCCG GACGGGGGCG GCCACCCGTG GTGGGAGGTC TACCAGCCGG TCAGCTATTC GCTGAACAGC CGGATGGGCA GCGAGGACGA CTTCAAGGCC ATGGTGAAGA CCTGCCGCGC GGCCGGCGTG CAGGTCATCG TGGACACCGT CATCAACCAC ATGACGGGCC AGGGCTCGAC CTCCTACGAC CCGGCCACCA CCGGATGGAC CCACACCAAC TACCCGGGGC TGTATTCGGC CGCGGACTTC CACACCTCGC CGGCCGACTG CCCGGAGGCC AGCAACACCA TTGACGACTT CAACGACTAC CGGCAGGTCA CCCAGTGCCA GCTGGTCGGT CTGGCCGATC TGCGGACCGA GTCCGACGCC GTGCGCACGC AGATCGCCGG GTACTTGAAC AAGCTGCTGT CCTACGGGGT CACCGGGTTC CGGGTGGATG CGGCCAAGCA CATCGGCCAG GCCGATCTCG CCGCGATCGT CAAGAAGCTC AACCGCACCG TCGACGGCAA GCGCCCGTAC ATCGCCCTGG AGGTGCCGCC GGGCGGGCCG GGCAAGCTGA CCCCGTTCGC CTTCCAGGAC CAGGGCAACC TGCTCGGGTT CGATTTCGCC ACCCAGGTCA AGGCCGCCTT CACCAGCAAC CTCACCGACC TGACGGTGTT CGGGGAGGAT GCCGGACTGC TGCCCAGTGA CCACTCGCTG GTCTTCGTGC AGAACCACGA CACCGAGCGG GACGGCACGA CGCTGAGCTA CAAGAACGGG CCGACCAACA CCCTGGCCAC CGAGTTCATG CTGGCCTACG GGTACGGCCG GGCCGAGGTC TACTCCGGCT TCGTCTTCGC CAACAAGGAC GACTCACCCC CGGCCGACGC CAACGGGTTC GTCACCGACG CCAACTGCGA CAACGGCTGG GCTTGCACCC ACCGCAGCCG GGGGGTGGCC AACCTGGTCG ACTTCCACAA CTTCGTCGGC GACGCGCCGG TGCGCAACGT CGACGACGAC GGGGTCAACC TGCTCGCCTT CAGCCGGGGC AACAAGGGCT GGATCGCGCT GAACAACCAC GACACCCCGC AGACCCGGAC GTTCTCGACC GGGCTGCTGC CCGGCGTCTA CTGCGACGTC ATCCACGGCA CCTACAGCCA GGCCTCGCGG GGCAAGAGCT GCGACGGACC GACGGTGACC GTGGGCTCGT CGGGCAAGGC GACCGTGACC GTTCCGGCCA AGGACGCGGT CGCGTTCAGC GCCGGGAACC GGGTCGGCCG CTGA
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Protein sequence | MTRPALRRLG TVALAATLAV TINQVVAPAA AAETTSVTVA GSFDQEIGCA DDWQPACAAA HLDKQPNGQF AKTLTIPDSG SGATSYGYKF ATNDSWNNPN FGLRGGSGDI ALPIPAGGQN VTFVFDPVSN LGSDSINSAA ISGTFQRQLG CAADNTLSCP QSWLYDDDHD GVFTLVTGAI APGSYTVSAA TLGSSSGSAP VTFTVPAAGG GATTTISFDP KAGAPTVSVV PLVQPAPATF SHPTAKRGDV VANLFEWNWK SVSTECQTVL GPAGYGAVQV APPQNSINNP DGGGHPWWEV YQPVSYSLNS RMGSEDDFKA MVKTCRAAGV QVIVDTVINH MTGQGSTSYD PATTGWTHTN YPGLYSAADF HTSPADCPEA SNTIDDFNDY RQVTQCQLVG LADLRTESDA VRTQIAGYLN KLLSYGVTGF RVDAAKHIGQ ADLAAIVKKL NRTVDGKRPY IALEVPPGGP GKLTPFAFQD QGNLLGFDFA TQVKAAFTSN LTDLTVFGED AGLLPSDHSL VFVQNHDTER DGTTLSYKNG PTNTLATEFM LAYGYGRAEV YSGFVFANKD DSPPADANGF VTDANCDNGW ACTHRSRGVA NLVDFHNFVG DAPVRNVDDD GVNLLAFSRG NKGWIALNNH DTPQTRTFST GLLPGVYCDV IHGTYSQASR GKSCDGPTVT VGSSGKATVT VPAKDAVAFS AGNRVGR
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