Gene Namu_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5177 
Symbol 
ID8450808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5768868 
End bp5769638 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content75% 
IMG OID645044211 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_003204435 
Protein GI258655279 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCG GGCACGGCCA CACCCACGTG CTGTTCGTGC ACCACGACTC CGGGGTGCAC 
CGGCTGGCTC CGCAGTGCAA GGTCGTCGCG ACCGTGCTGT TCGTGTTCGC GGTGGTGGCG
ACCCCGCGGG AGGCGTTCTG GGCGTTCGCG GTGGACGCGG TGATCCTGCT GATCGTGGCC
CTGGCCGCCC GGGTGTCGCT GCGCCGGTGG GCCCGCCGCT GCCTGGTCGA GGTGCCGTTC
CTGCTGTTCG CGGTCTTCCT GCCGTTCGTC GGCACCGCCC CCTACGTGCA GGTCGGTCCG
CTGCTGCTGT CCGAGCCGGG ACTGTGGGGG GCGTGGAACA TCGCGGTCAA GGGCACGCTC
GGCGTCGCCG CGTCGGCCCT GCTGACCGCC ACCACCACGG TTCCGGACCT GCTGCGGGCG
CTGGAGCGGC TGCGGGTGCC GGCGGCGTTG GTGGCCATCG CGACGTTCAT GATCCGCTAC
GGCGAGGTGC TCGCCGCCGA CCTGGCCCGG ATGCGCATCG CCCGGGTCTC CCGGGGTGAC
GATCCCCGCT GGCTCTGGCA GGTCCGCGGG CTGGCCCAGA CCGCCGGTGC GTTGTTCGTC
CGGTCCTACG AGCGGGGCGA GCGGGTGTAC GTGGCCATGC TGGCCCGCGG GTACGGCTTC
GGGCCGGTCG CCCGCGCGGG TCAGCAGGCG CCGCGGCGGT CCTGGGCCCG AGCCCTGTCC
GTGCCGGCGG CCGCGGCCGT GGTCTGCGCC GCCGCGCTGA CGGTCGGATG A
 
Protein sequence
MGGGHGHTHV LFVHHDSGVH RLAPQCKVVA TVLFVFAVVA TPREAFWAFA VDAVILLIVA 
LAARVSLRRW ARRCLVEVPF LLFAVFLPFV GTAPYVQVGP LLLSEPGLWG AWNIAVKGTL
GVAASALLTA TTTVPDLLRA LERLRVPAAL VAIATFMIRY GEVLAADLAR MRIARVSRGD
DPRWLWQVRG LAQTAGALFV RSYERGERVY VAMLARGYGF GPVARAGQQA PRRSWARALS
VPAAAAVVCA AALTVG