Gene Namu_5168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5168 
Symbol 
ID8450799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5756316 
End bp5757029 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID645044202 
ProductClp domain protein 
Protein accessionYP_003204426 
Protein GI258655270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATT CCGCCTTTAC CCCCGCGCAG CCGCGACTGG ACGACCTCAT CAACGCCATC 
ACCGCGGTCC ACACCGACCC GCTGGAGCAG CTCACCGACG CCGTCCTCGC CGCCGATCAC
CTGGGCTCCC TGGCCGACCA CCTCATCGGC CATTTCGTCG ATCAGGCCCG CCGGTCCGGG
GCCTCGTGGA CCCAGATCGG GGCGAGCATG GGGGTGACCA AACAGGCCGC GCAGAAGCGG
TTCGTCCCCC GCGCCCCGTC CCTGGACCCG CAGCAGGGGT TCGAGGCCTT CACCCCGCGG
GCCCGCAACA CGATCGTGGC CGCGCAGAGC GAGTCACGGG AGCGGGGCGA CGATCAGGTC
CGGCCCGAGC ATCTGCTGCT CGGACTGCTG TCCGAGCCGG CCGGCCTGGC CATGAAGGCA
CTGGCCGAGC AGGGCCTGTC CGCCGATCGG ATCCGCGCGG CCACGGTCGC CGTCCTGCCC
GCGGGGCCGG GCCCGTCGCC CGACCCCATC CCCTACGACG CCACTGCCCA GAAGGTGCTG
CAGCTGACCT TCCGCGAGGC GTTGCGGCTG GGCCACAACT ACATCGGCAC CGAACACGTC
CTGCTGGCCC TGCTCGAGTT CGAGGGCGGG TCCGGGGTAC TCGCCGGGCT CGGCGTGGAC
CGCGAGCGGG TCGAGGCCAG CCTGCTCGCC GCCCTGGGCG GCCTGTCCGG GTAA
 
Protein sequence
MTDSAFTPAQ PRLDDLINAI TAVHTDPLEQ LTDAVLAADH LGSLADHLIG HFVDQARRSG 
ASWTQIGASM GVTKQAAQKR FVPRAPSLDP QQGFEAFTPR ARNTIVAAQS ESRERGDDQV
RPEHLLLGLL SEPAGLAMKA LAEQGLSADR IRAATVAVLP AGPGPSPDPI PYDATAQKVL
QLTFREALRL GHNYIGTEHV LLALLEFEGG SGVLAGLGVD RERVEASLLA ALGGLSG