| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5167 |
|---|
| Symbol | |
|---|
| ID | 8450798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5754374 |
|---|
| End bp | 5756176 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 645044201 |
|---|
| Product | Methylmalonyl-CoA mutase |
|---|
| Protein accession | YP_003204425 |
|---|
| Protein GI | 258655269 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC TCAACGACCA GAGCCCGCTG CGGCTGGCCG CCGGTGACGT GGATGCCCAC
GACTGGGAAC AGGCCGCCGC GGCCGTGCTG ACCCGGCTCA AGCGCGCCCC CGAACGCCCG
GCCGACGTGT GGCCGGCCCT GTCCCGATCG ACGATCGAGG GCGTACCAAT CCCGGCCCTG
GGGACCGCCC AGCGGTCGGC CGGGCGCGTG CTGCCGGTCG AGTTGCCCGT CCGCGACGGC
GCCTGGGACG TGCGAGCCGC GGTGTTCGAC GCCGACCCGG CGGCCGCCGC CGGCGCCGCC
CTGGACGAAC TGGAGAACGG CGCCACCTCG CTCTGGCTCA CCCTGAGCGA ATCGGGCCTG
ACCCCCGACG CCCTGCCGGC CGCACTGGCC CCGGTGCGGT TGGACTGGGC GCCGGTCGTC
GTCGGCGCCG GCCCGGGAGT CAGCGAGCGG GCCGGCGCCC ACGCCCTGGC CGCGGCGCTG
CGGGCGGCCG CCGGGCCAGC GGCCGTCGGC ACCAACCTGG GTGCCGACCC GGTCGGCCGG
GCCGTGCGGG CGAGTGGTGA GGGCGGCGAA CCCGACGAGA TCGCTGCCGT CATCGCCGAG
ATCGCCGGTC TGGCCACCGA CCTGGAGGTG CTCGGGTTCG TCGTGGACGG CACCGTCGCC
CACGATCACG GGGCGGGCGA GGCGGCCGAA CTGGGCTACG CGATGGCCGC CGGCGTACAC
CTCCTGCGGG CGTTGACCGC GCACGGACTC GATCTGGCGG CCGCGCTGCG CCTGCTGGAA
TTCCGGCTGG CCGTCACCGA CGACCAGTTC GCCTCGATCG CCAAGCTGCG GGCCGCCCGG
GTGCTGTGGG CCCGGGTCGC CCAGCTGGTC GGCGCCCCCG CGGGCATGCG GATCCACGCC
GTGACCTCGC GCCCGATGAC TACCCGATAC GACCCGTGGG TCAACCTGCT GCGCACCACG
GTGGCCGCCT TCGCCGCCGG GGTCGGGGGA GCGGACGCGA TCACCGCGCT GCCGTTCGAC
CTGCGGCTGG GCGTGCCGGA CGCGTTCGGC CGGCGGCTGG CCCGCAACAT CGGCGCGCTC
CTGATCGAGG AGTCGCACGT GGCCGCCGTG ACCGATCCGG CGGCCGGCGC CTATGCGGTG
GAGGCGCTGA CCGCCGACCT GGCCGACGCC TCCTGGGCCC GGTTCCAGGC GATCGAGCGG
GCCGGCGGGG TACTCGGCGC CCTGACCGAC GGGTCGCTGA CCGGAGGCTG GGCGCAGACC
GCGGCCCGGC GCCGGGAGCG GATCGCCCGC CGCCGGCTGC CGATCACCGG GGTGAGCGAG
TTCCCGAACC CCGGCGAGGC GCTGCCGGTC CGCCCGCCGT GGCCGGCGCC GCCCGAGACG
CAAGCCTGGG CGGCCGATTT CGAGCAGCTG CGGGACGCCC CCGCGCACAC CCCGGTGTTC
CTGGCCACCC TGGGCCCGGT AGCCGAGCAC GCCGCCCGGG CCGGGTTCGT CACCAACCTG
CTGGCCGCCG GCGGGGTGCC GGTCCGGTCG GCCGGCCGCA CGCAGGGCCC GGCCGACCTG
GCCGCCGCCT GGCAGGGTGA GCCGGTGGTC GTGGTGGCCG GCGCCGACCC GACCTACGCG
GTCTGGGGGG CCGACGCGGT CGCCGCGCTG CGGGCGGCCG GGGCGCGCAC CGTCATCCTG
GCCGGCGCCC CGCCGGCCGA ACTGGCTTCC CTGGTCGACG ACCACGTCGC CGCCGGCCAG
GACGCGATCG ACTTCCTGCG GCGGCTGCGC GCCGCGCTCC CGACCGAGGT GGTGGCCCGA
TGA
|
|---|
| Protein sequence | MSELNDQSPL RLAAGDVDAH DWEQAAAAVL TRLKRAPERP ADVWPALSRS TIEGVPIPAL
GTAQRSAGRV LPVELPVRDG AWDVRAAVFD ADPAAAAGAA LDELENGATS LWLTLSESGL
TPDALPAALA PVRLDWAPVV VGAGPGVSER AGAHALAAAL RAAAGPAAVG TNLGADPVGR
AVRASGEGGE PDEIAAVIAE IAGLATDLEV LGFVVDGTVA HDHGAGEAAE LGYAMAAGVH
LLRALTAHGL DLAAALRLLE FRLAVTDDQF ASIAKLRAAR VLWARVAQLV GAPAGMRIHA
VTSRPMTTRY DPWVNLLRTT VAAFAAGVGG ADAITALPFD LRLGVPDAFG RRLARNIGAL
LIEESHVAAV TDPAAGAYAV EALTADLADA SWARFQAIER AGGVLGALTD GSLTGGWAQT
AARRRERIAR RRLPITGVSE FPNPGEALPV RPPWPAPPET QAWAADFEQL RDAPAHTPVF
LATLGPVAEH AARAGFVTNL LAAGGVPVRS AGRTQGPADL AAAWQGEPVV VVAGADPTYA
VWGADAVAAL RAAGARTVIL AGAPPAELAS LVDDHVAAGQ DAIDFLRRLR AALPTEVVAR
|
|---|
| |