Gene Namu_5151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5151 
Symbol 
ID8450782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5739746 
End bp5740789 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content63% 
IMG OID645044185 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003204409 
Protein GI258655253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTGGT TCCTGCGACC CGAGTCCGTC ACCGACAAGT TGCTCGTGAT GGTCGTCGCG 
ATCCTGCTGT TCGTCGTCGT GCTCGGTGGC ATCTTGTGGC TGATCGACCG CCCGAAGGTG
CCGTTGTGGG TCCTGGTGGC CGGGTTCCTC GGACCGGTCA CGATCGCCCT GGCCGTCGGC
CTGTTCTATC CGGCCGCGCT CACGGTCTGG CGTTCTTTCC AGGTCAGCTC CGTCGTCCTG
GGTGACAACG GCAAGCCGAT CATCGACCGG GCCACCGGTC AACGATCGAC CGCCCTGAGC
TTCAGCCTGG ACAACTACAA AGAGGTCTTC ACCGACCCGA ACTTCCAGAA GGTCCTGATC
AACACCGCGA TCTGGGTCAT CTTCGTGCCG ATCGTGGCCA CCATCTTCGG CCTGGTCTAC
GCGGTCATCG TGGACCGGAC CCGGTTCGAG AAGGTCGCCA AGGCCCTGAT CTTCCTGCCG
ATGGCCATCT CCATGGTCGG CGCCTCGATC ATCTGGAAAT TCGTCTACGA GTACCGGCAG
GCCGGCGTCC CGCAGATCGG TCTGGGCAAC CAGATACTGG TCTGGCTCGG GCTCGACCCC
TACCAGTTCC TCATCACCGA GCCGTGGAAC ACCTTCTTCC TGATCGTGGT GATGATCTGG
ATCCAGGCCG GGTTCGCCAT GACGCTGCTC TCGGCGGCCA TCAAGGCCGT GCCCGACGAC
ATCGTCGAGG CCGCCCAGCT CGACGGGGCC ACCGGCTTCA AGCTGTTCAT GAAGGTCACC
GTGCCCACCA TCCGGCCGGC CATCGTCGTG GTGCTCACCA CCATCGCCAT GGCCACCCTG
AAGGCCTTCG ACATCGTCCG CACCATGACC GGCGGCAACT TCGGCACGTC CGTGGTGGCC
AACGAGTTCT ACACCCAGTC GTTCCGCCAG GGCGAAGAAG GCAAGGGCCT GGGCGCCGCC
CTGGCCGTCA TCCTGTTCGT GATCATCATC CCGGTCATCG CGTACAACGT TCGGCAGATG
AGGCTCGTGG AGGAAACCCG ATGA
 
Protein sequence
MDWFLRPESV TDKLLVMVVA ILLFVVVLGG ILWLIDRPKV PLWVLVAGFL GPVTIALAVG 
LFYPAALTVW RSFQVSSVVL GDNGKPIIDR ATGQRSTALS FSLDNYKEVF TDPNFQKVLI
NTAIWVIFVP IVATIFGLVY AVIVDRTRFE KVAKALIFLP MAISMVGASI IWKFVYEYRQ
AGVPQIGLGN QILVWLGLDP YQFLITEPWN TFFLIVVMIW IQAGFAMTLL SAAIKAVPDD
IVEAAQLDGA TGFKLFMKVT VPTIRPAIVV VLTTIAMATL KAFDIVRTMT GGNFGTSVVA
NEFYTQSFRQ GEEGKGLGAA LAVILFVIII PVIAYNVRQM RLVEETR