Gene Namu_5143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5143 
Symbol 
ID8450774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5731013 
End bp5731969 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID645044177 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003204401 
Protein GI258655245 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA CCGTGCTCGT CACCGGCGCC TCCGGCTTCG TCGGATCCCA CCTGGTTCCG 
GCCCTGATCG ACCGCGGCTA CCGGGTTCGG GCGATGACCC GGCATCCGGA CACCTACGAC
GGCCCGGGCG AAGCGGTTTA CGGCGACGTC GCGGACACCG ACAGCCTGCG GGCGGCCCTG
GCCGGCACCA GCGCGGCCTA CTACCTGGTG CATTCGCTGG CCTCCGACGA CTTCGAACAA
CGCGACGCGG AGGCGGCCAC CGCCTTCGGG CACGCGGCCG CCGAGGCCGG CCTGATGCAG
ATCATCTACC TGGGCGGTCT CGGCGACGTC GACGATTCGC TGTCCCCGCA CCTGCAGTCC
CGCCGCGACG TGGAGCAGCT GCTCGCGGTC GGTGGGGTGC CGGTGACGGT GTTGCGCGCC
GCCGTGGTGA TCGGGCACGG CGGGATCTCC TGGGAGATCA CCCGCCAGCT GGTCGACCAC
CTGCCGGCCA TGGTCACCCC CAAGTGGGTC GGCACCCGGA CCCAGCCGAT CGCGTTGCGC
GACGTCATCC GCTATCTGGC CGGCGTGCTG GACAACCCCG GCGCGCTGGG CAAGGTGTTC
GAGGTCGGCG GCCCGGAGGT GCTCAGCTAT GCGGACATGA TGCGGCGGGC GGCCAAGATC
CAGAACCATC GGGTGCCGCC GATCGTGCCC ATCCCGTTGC TCACGCCGCG GTTGTCCTCG
CTGTGGCTGG CGCTGATCAC CGATGTCGAC CAGGCCACCG CCCGCAACCT GATCGACTCG
ATGAACAACG AGGTCGTCGT GCACGACCAC TCCATCCGGG AATTGCTCCC CGGCGACCTG
ACCGGGTATG AAGATTCGGT GCGAGCCGCG TTACGGGACC GAGCGCAGGA CCCGTCGGTG
CCGGACGAGG CCGGCCAGCC CGAAGCCGAG GCGAGCGCGG ACCCGGCCCG TTCGTGA
 
Protein sequence
MTSTVLVTGA SGFVGSHLVP ALIDRGYRVR AMTRHPDTYD GPGEAVYGDV ADTDSLRAAL 
AGTSAAYYLV HSLASDDFEQ RDAEAATAFG HAAAEAGLMQ IIYLGGLGDV DDSLSPHLQS
RRDVEQLLAV GGVPVTVLRA AVVIGHGGIS WEITRQLVDH LPAMVTPKWV GTRTQPIALR
DVIRYLAGVL DNPGALGKVF EVGGPEVLSY ADMMRRAAKI QNHRVPPIVP IPLLTPRLSS
LWLALITDVD QATARNLIDS MNNEVVVHDH SIRELLPGDL TGYEDSVRAA LRDRAQDPSV
PDEAGQPEAE ASADPARS