Gene Namu_5139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5139 
Symbol 
ID8450770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5728351 
End bp5729568 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID645044173 
Productaminotransferase class I and II 
Protein accessionYP_003204397 
Protein GI258655241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGA TCACCCAGAG TCTGAAACTG CGCGGCGTCC GCTACGACGT CCGGGGACCG 
ATCCTGGAGG AGGCCGAGCG CCTCGAGGCA CAGGGGCACA AGATCCTCAA GCTCAACATC
GGCAACACCG CACCGTTCGG ATTCGACGCT CCCGACGCGA TCCTGGCCGA CATGATCCAC
AACCTGCCGC AGTCCCAGGG CTACAGCGAC TCCCGCGGCA TCTACTCGGC CCGCACGGCC
GTCGCGCAGT ACTACCAGTC GCGGGGTCTC AAGGACGTCG ACGTCGATGA CGTCTACATC
GGCAACGGCG TGTCCGAGCT GATCTCCATG GTGCTGACCA CGTTCATCGA CGACGGCAAT
GAGGTGCTCG TGCCGGCCCC GGACTACCCG CTGTGGACGG GCGCGGTCAC GCTGGCCGGC
GGCACCCCGG TGCACTACCG CTGCGACGAG GCCAACGGTT GGATCCCCGA TCTTGAGGAC
ATCGAGTCCA AGATCACCGA CGCCACCTTC GCGATCGTCA TCATCAACCC GAACAATCCC
ACCGGCGCTG TCTACAGCGC GGACGTGGTG CGGGGCCTGG TCGACATCGC GCGCAAGCAC
GATCTGGTGG TGATGGCCGA CGAGATCTAC GAGAAGATCA TCTTCGACGA TCACGTGCAC
CACCACGCCG CCACCTTCGC CGGCGACGAC GTCCTGTGCC TGACGTTCAG CGGCCTGTCC
AAGGCCTACC GGGTCTGCGG GTACCGGGCC GGCTGGGTCA TGGTCTCCGG GCCCACCCAT
CTGGCCACCG ACTTCCTGGA GGGCCTGACC CTGCTGGCCA ACATGCGCAT GTGCGCGAAC
GTGCCCGGCC AGCACGCCAT CCAGACCGCC CTGGGCGGGT ATCAGTCGGT CAACGAGCTG
ATCGTTCCCG GCGGCCGGTT CTACGAGCAG AGCAAGCTCG CCTGGAACCT GCTGAACAAG
ATCCCCGGGG TCAGCTGCAC CGAACCGCAG GGCGCGCTGT ACTGCTTCCC CCGGCTGGAT
CCCGAGGTCT ACCCGATCGA CGACGACCAG GAATTCGTCA TCGACCTGCT GCGGGCCAAG
AAGATCCTGG TCACCCACGG CACCGGGTTC AACTGGTTCC ACTCCGACCA CTTCCGGCTG
GTCACCCTGC CGTCGGTGGA GATCCTGGAG GAGGCGATCG GCCGGATCGC CTCCTACCTG
GAGTCGCTGC GCGAGTAG
 
Protein sequence
MRLITQSLKL RGVRYDVRGP ILEEAERLEA QGHKILKLNI GNTAPFGFDA PDAILADMIH 
NLPQSQGYSD SRGIYSARTA VAQYYQSRGL KDVDVDDVYI GNGVSELISM VLTTFIDDGN
EVLVPAPDYP LWTGAVTLAG GTPVHYRCDE ANGWIPDLED IESKITDATF AIVIINPNNP
TGAVYSADVV RGLVDIARKH DLVVMADEIY EKIIFDDHVH HHAATFAGDD VLCLTFSGLS
KAYRVCGYRA GWVMVSGPTH LATDFLEGLT LLANMRMCAN VPGQHAIQTA LGGYQSVNEL
IVPGGRFYEQ SKLAWNLLNK IPGVSCTEPQ GALYCFPRLD PEVYPIDDDQ EFVIDLLRAK
KILVTHGTGF NWFHSDHFRL VTLPSVEILE EAIGRIASYL ESLRE