Gene Namu_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5116 
Symbol 
ID8450747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5703111 
End bp5703668 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content73% 
IMG OID645044151 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_003204375 
Protein GI258655219 
COG category[S] Function unknown 
COG ID[COG1755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TGACCGCCTT CGTCGTGCTG GTGGCCCTGG TCGGCCTGGA GCGGCTGGCC 
GAGCTGGTGG TCTCCACCCG CAACGCCACC TGGAGCTTCG CCCACGGCGG CCGGGAGACC
GGCCGCGGCC ATTACCCGGT GATGGTCGTC CTGCACACCG GGTTCCTGGT GGCGATGCTG
GTCGAGGCGT TCGTACGCCG GCCGGTGGTG CCCGGGTGGC TGGCCTGGTC GATGCTGGCC
CTGGTGCTGG CCGCCCAGGC CCTGCGCTGG TGGTGCATCG CCACCCTGGG ACGCCGTTGG
AACACCCGGG TGATCGTCGT GCCCGGGCTG CCCCCGGTCC GCTCCGGCCC CTACCGCTGG
CTGGCCCATC CCAACTACGT TGCGGTCGTC GTCGAGGGGG TGGCCTTGCC GATGGTGCAC
GCCGCCTGGA TCACCGCCGT CACCTTCACC GTGGCCAACA CCGCGCTGCT GGCCGTCCGG
ATCCGGGTCG AGAACGAGGC CCTGTCCGCC CTGCGCGGGC CCGCCGACCG GCCGGTCGGC
GCACCGACCG ATGCGTGA
 
Protein sequence
MTSLTAFVVL VALVGLERLA ELVVSTRNAT WSFAHGGRET GRGHYPVMVV LHTGFLVAML 
VEAFVRRPVV PGWLAWSMLA LVLAAQALRW WCIATLGRRW NTRVIVVPGL PPVRSGPYRW
LAHPNYVAVV VEGVALPMVH AAWITAVTFT VANTALLAVR IRVENEALSA LRGPADRPVG
APTDA